Example Sequences

>gi33300549
CCTCAAATCACTCTTTGGCAACGACCCCTAGTCACAATACAAGTAGGGGGACAGCTAAGGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATAAATTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAAACAGTATGATAACATATGCATAGACATTTGTGGACACAAGGCTATAGGTACAGTGTTGGTAGGACCTACACCTGCCAACATAATTGGAAGAAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCGATTAGTCCTATTGAAACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATATGTACAGAAATGGAAAAAGAAGGAAAAATTTCAAGAATTGGGCCTGAAAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGATTTTTGGGAGGTCCAATTAGGAATACCGCATCCTGCAGGGTTAAAAAAGAAAAAGTCAGTAACAGTACTGGATGTGGGGGATGCATATTTTTCAGTTCCCTTAGATAAGGACTTCAGGAAGTACACTGCATTCACCATACCTAGTCTCAACAATGAGACACCAGGAATTAGGTACCAGTACAATGTGCTTCCACAAGGATGGAAAGGATCACCAGCAATATTCCAATGTAGCATGACAAAAATCTTAGATCCTTTTAGAGCAAAAAATCCAGACATAGTTATCTACCAATACGTGGATGATTTGTATGTAGGGTCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAGTTAAGAGAACATCTACTGAAATGGGGATTTTTTACACCAGACAAAAAACATCAAAAGGAGCCCCCATTCCTTTGGATGGGGTATGAACTCCATCCTGATAAATGGGCAGTGCAG

>gi333005683
CCTCAAATCACTCTTTGGCAACGACCCCTAGTCACAATACAAGTAGGGGGACAGCTAAGGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATAAATTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAAACAGTATGATAACATATGCATAGACATTTGTGGACACAAGGCTATAGGTACAGTGTTGGTAGGACCTACACCTGCCAACATAATTGGAAGAAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCGATTAGTCCTATTGAAACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATATGTACAGAAATGGARAAAGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGAAAGTTCTAGTTCTAAATGGAGAAAGGTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGTGAAGTCCAATTAGGAATACCACATCCTGCAGGATTAAAAAAGAACAAATCAGTAACARTACTRGATGTGGGTGATGCATATTTTTCAATTCCCTTAGATGAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGAAACCAGGGATTAGATATCAGTACAATGTGCTYCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTATAGAAAACAAAATCCAGACATAGTTATCTGTCAATACATGGATGATTTGTATGTAGCATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGACAACATTTGTGGAAGTGGGGATTCTACACACCAGACAAAAAATATCAGAAAGAACCCCCATTCCTTTGGATG

>gi|20136660|gb|AF493411.1
CCTCAGATCACTCTTTGGCAGCGACCCTTCGTTACAATAAAAATAGGGGGACAACTAATAGAAGCCCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATAGATTTGCCAGGAAGATGGAAACCAAAAATAATAGGAGGAGTTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGGTACCTGTAGAAATCTGCGGACATAAAGTTATAACTACAGTATTAGTAGGAGCTACACCTGTCAACATAATTGGAAGAAATCTGATGACTAAGATTGGCTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTCAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAATAGAAATTTGTACAGAATTGGARAAAGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGAAAGTTCTAGTTCTAAATGGAGAAAGGTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGTGAAGTCCAATTAGGAATACCACATCCTGCAGGATTAAAAAAGAACAAATCAGTAACARTACTRGATGTGGGTGATGCATATTTTTCAATTCCCTTAGATGAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGAAACCAGGGATTAGATATCAGTACAATGTGCTYCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTATAGAAAACAAAATCCAGACATAGTTATCTGTCAATACATGGATGATTTGTATGTAGCATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGACAACATTTGTGGAAGTGGGGATTCTACACACCAGACAAAAAATATCAGAAAGAACCCCCATTCCTTTGGATG

>HMDR4
CCCATTAGTCCTATTGAAACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAATTGGAAGAGGCAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAGGAAAAAGAATAGTACTAAATGGAGAAAAATAGTAGATTTCAGAGAACTTAATAAGAAAACTCAAGACTTTTGGGAAGTTCAATTAGGAATTCCACATCCCGGAGGGTTAAAAAAGAAAAARTCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCCTTAGATAAAGACTTCAGGAAGTATACTGCCTTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTCCCACAGGGATGGAAAGGATCACCAGCAATATTCCCAAGCTGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACGTGGATGATTTGTATGTAGGATCTGACTTAGAAATAGAGCAGCATAGAACAAAAATAGAGGAACTAAGACAATATCTATGGAAATGGGGATTTTACACACCAGAGAACAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTACCAGAAAAAGA

>CRF02_AG.FR.DJ263
AAATTGGGCCTGAAAATCCATACAATACTCCAGTGTTTGGCATAAAGAAGAGAGATAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTCAATAAGAGAACTCAAGACTCCTGGGAGGTCCAATTAGGAATACCTCATCCCGCGGGATTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGTGATGCATATTTTTCAGTCCCCTTAGATAAAGACTTTAGAAAGTATACTGCATTCACTATACCTAGTACAAATAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGGCAAGCATGACAAACATCTTAGAGCACTATAGAATAAAAAATCCAGAGATAATGATCTACCAATATATGGATGATTTATATGTAGGATCTGACTTAGAGATAGAGCAGCATAGAGCAAAAATAGAGGAGTTGAGAGAACATCTACTAAAATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGATATGAACTCCATCCTGACAAATGGACAGTCCAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGATATACAGAAATTAGTGGGAAAACTAAATTGGGCAAGTCAGATTTATGCAGGAATTAAAGTAAAGCAACTGTGTAAACTCCTCAGGGGAGCCAAAGCATTAACAGATATAGTACCACTGACTGAGGAAGCAGAATTAGAATTGGCAGAGAACAGGGAAATTCTAAAAGAACCTGTACATGGAGTATATTATGACCCAGCAAAAGACCTAATAGCAGAAATACAGAAACAAGGGCAAGACCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTAAAAACAGGAAAATATGCAAAAAGGAGGTCTGCCCACACTAATGATGTAAAACAATTAGCAGAGGTAGTGCAAAAAGTGGTTACAGAAAGCATAGTAATATGGGGAAAGACCCCTAAATTTAGACTACCCATACAAAGAGAAACATGGGAAGCATGGTGGATGGAGTATTGGCAGGCTACCTGGATTCCTGACTGGGAGTTCGTCAATACCCCTCCTCTAGTAAAATTGTGGTACCAGTTAGAGAAAGACCCCATAGTAGGAGCAGAAACCTTCTATGTAGATGGGGCAGCTAATAGGGAGACTAAGCTAGGAAAAGCGGGGTATGTCACTGACAGAGGAAGACAAAGGTTGTTTCCCTAACTGAGACAACAAATCAAAAGACTGAGTTACATGCAATTTATCTAGCCTTGCAGGACTCAGGATCAGAAGTAAATATAGTAACAGACTCACAGTATGCATTAGGAATCATTCAGGCACAACCAGACAGGAGTGAATCAGAGTTAGTCAATCAAATAATAGAGAAGCTAATAGAAAAGGACAAAGTCTACCTGTCATGGGTACCAGCACACAAAGGGATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTAATGGAATCAGGAAGGTACTATTTTTAGATGGCATAGATAAAGCCCAAGAAGAGCATGGAAGATATCACAGCAATTGGAGAGCAATGGCTAGTGATTTTAATCTGCCACCTATAATAGCAAAAGAAATAGTGGCCTGCTGTGATCAATGTCAGCTGAAAGGGGAAGCCATGCATGGACAAGTAGACTGTGGTCCAGGAATATGGCAATTAGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTCCATGTAGCCAGTGGTTATATAGAAGCAGAAGTTATCCCAGCAGAAACAGGACAGGAGACAGCATACTTTATACTAAAATTAGCAGGAAGATGGCCAGTGAAAGTAATACACACAGACAATGGCAGCAATTTTACCAGTGCTGCAGTAAAGGCAGCATGTTGGTGGGCAAATGTCACACAGGAATTTGGAATTCCCTACAATCCCCAAAGCCAAGGAGTAGTGGAAGCTATGAATAAAGAATTAAAGAAAATCATAGGGCAGGTCAGGGATCAAGCTGAACACCTTAAGACAGCAGTACAGATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCATCAGATATACAAACTAAAGAACTACAAAAACAGATTACAAAAATTCAAAATTTTCGGGTCTATTACAGGGACAGCAGAGACCCCATTTGGAAAGGACCAGCAAAACTACTCTGGAAAGGTGAAGGGGCAGTAGTAATACAGGACAAGAGTGATATAAAGGTAGTACCAAGAAGAAAAGCAAAAATCATTAAAGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGA