@CHARSET "UTF-8";

/* Improved accessibility */
.nav-tabs a {font-weight: bold}
.sidebar-menu a {font-weight: bold}
.navbar a {color: #595959}
.navbar a:hover {color: #595959}
.navbar a:visited {color: #595959}

/* general layout */

html {
	padding: 0px;
	margin: 0px;
	border: 0px;
}

body {
	background-color: white;
	padding: 0px;
	margin: 0px;
	border: 0px;
}

div.imgDiv, div.downloadContainer{
	width: 100%;
	margin: 1em auto 0.5em auto;
	text-align: center;
}

.root {
	padding-left: 
}

.header {
	display: block;
	margin-left: auto;
	margin-right: auto;
}

.form {
	/*width: 85%;*/
	margin: 0px auto;
}

table.jobTable, div.jobTable {
	border-spacing: 2px;	
	table-layout: inherit;
}

table.reftable {
	width: 70%;
	margin-left: 0;
	margin-right: auto;
	border-spacing: 2px;
}

table.jobTable td, table.jobTable th, div.jobTable td, div.jobTable th {
	border-top: 1px inset gray;
	border-bottom: 1px inset gray;
	padding: 0.2em 0.5em;
	text-align: left;
	line-height: 30px;
	vertical-align: middle;
}

table.jobTable th, div.jobTable th {
	padding: 0.5em;
}

table.reftable td, table.reftable th {
	border-top: 1px inset gray;
	border-bottom: 1px inset gray;
	padding: 0.5em;
	text-align: left;
}

table.jobTable col,
table.reftable col {
	border-left: 1px outset gray;
	border-right: 1px outset gray;
}

table.jobTable .nrb {
	border-right: 0px;
}

table.jobTable .nlb {
	border-left: 0px;
}

table.jobTable .jobTableHeader {
	line-height: 15px;
	font-weight: bold;
	text-align: center;
  	position:relative;
}

table.jobTable td img {
	display: block;
	margin-left: auto;
	margin-right: auto;
}

table.jobTable.bacteria td {
    vertical-align: top;
}

table.jobTable td.jobTable-groupheader {
    font-style: italic;
    font-weight: bold;
    padding-left: 40px;
    border-bottom: 4px double gray;
}

.decisionTreeHeader {
	display: block;
	margin: 1em auto 0.5em auto;
	text-align: center;
	font-size: 110%;
	font-weight: bold;
	color: darkblue;
}
	
.listContainer {
	margin-top: 0.5em;
	margin-bottom: 1em;
}

.footer{
	margin-top:15px;
	text-align: center;
	font-style: italic;
}

.edit-invalid {
	background-color:#f5baaa;
}

.edit-valid {
}

.details-extraComments {
	font-style:italic;
}

table.csv {
	width: 800px;
	empty-cells: hide;
	margin-left: auto;
	margin-right: auto;
}
table.csv td, table.csv td{
	padding: 0.2em;
	background-color: rgb(240,240,240);
	border: 2px solid white;
}
table.csv tr:first-child td{
	color: white;
	background-color: darkblue;
}

div.sequence, div.sequenceName {
	font-size: 75%;
	display: block;
	width: 500px;
	word-break: break-all;
	margin-left: auto;
	margin-right: auto;
	font-family: monospace;
}

div.sequence {
	margin-bottom: 1em;
}

span.refseq{
	display: block;
	/*text-align: center;*/
}

.monitor-form{
	/*text-align: center;*/
}

.error {
	color: red;
	font-style: italic;
	padding: 1em;
}

.cite {
	vertical-align: super;
	font-size: 80%;
}

.bibitem {
	font-size: 80%;
}

.bibitem span {
	color: blue;
}

table.assignment-overview {
	border: 1px solid black;
	table-layout: inherit;
}

.assignment-overview th {
	background-color: rgb(200,200,200);
	padding: 0.5em;
	text-align: center;
}

.assignment-overview th, .assignment-overview td {
	border-left: 1px solid black;
	padding: 0.5em;
}

.assignment-overview div {
	width: 35px;
	height: 10px;
}

.assignment-overview-total {
	border-top: 1px solid black;
}

.assignment-overview-newAssignment {
	border-top: 1px solid black;
}

.assignment-overview-filter {
	border: 1px solid black;
	padding: 0.5em;
}

.assignment-overview-filter th, .assignment-overview-filter td {
	border-left: 1px solid black;
	padding: 0.5em;
}

.recombination-form {
	width: 1200px;
	margin-left: auto;
	margin-right: auto;
}

.recombination-form table {
	width: 1000px;
	margin-left: auto;
	margin-right: auto;
}
.recombination-form .region {
	border: 1px solid black;
	margin: 2px;
	padding: 1em;
}
.recombination-form .region:first-line{
	font-size: 120%;
	font-weight: bold;
	text-align: center;
}

.jobOverviewSummary {
	margin: 30px auto;
	table-layout: auto;
}

/* Background info pages */
.bold{
  font-weight:bold;
}
.centerimage{
  text-align:center;
  margin-top:0px;
  margin-bottom:0px;
  padding:0px;
}
.centertext{
  text-align:center;
}
.pic-label{
  font-weight:bold;
  font-size:110%;
  margin-bottom:20px;
  text-align:center;
}
table.reftable caption {
  font-weight:bold;
  font-size:110%;
  margin:5px 0 5px 0;
}

/* Inherited from rivm because many tools used rivm css in the past. */

.rivm-header div#logo {
	/*background-color: #ffffff;*/
	text-align: center;
}

.rivm-header div#logo a {
	text-decoration: none;
}
/**
.rivm-header div#text div {
	position: absolute;
}
*/
.rivm-header div#application {
 	/*padding-left: 25px;
	background-color: #eaf7ff;
 	height: 30px;
 	width: 100%;*/
}

.rivm-header span#name {
	font-weight: bold; 
	/*position: relative;*/
	top: 25%;
}

.rivm-header span#info {
	font-style: italic;
	/*position: relative;*/
	top: 25%;
}


.error-text {
	color: rgb(255,0,0);
}

.working {
    background: gainsboro;
}

.ngs-detils-table {
	/*text-align: center;
	width: 100%;*/
	min-width: 500px;
}

.single-ngs-result-table {
	margin-bottom: 10px;
	margin-top: 10px;
}

.single-ngs-result-table td {
   /* width: 1%;*/
    white-space: nowrap;
    padding:8px;
}

.ngs-view-rowheader {
	width: 1%;
}
.ngs-start-table td {
	padding:8px;
}

.ngs-table-separator {
    border-top: 2px solid !important;
}
.tab {
	margin-left:15px;
}

.ngs-start {
	min-height: 400px;
}

.ngs-start button{
	color: darkblue;
    font-weight: bold;
}

.ngs-chart-title {
    margin-left: 43px;
}

.ngs-view {
	max-width: 500px;
}

/* change wt wpanel */
.ngs-start-advanced {
	margin-top: 10px;
}

.ngs-start-advanced .Wt-panel {
	margin-top: 10px;
    border: 1px solid #888888;
    background: rgb(197, 197, 253) none repeat scroll 0%;
}

.ngs-start-advanced .Wt-panel .titlebar {
    padding: 0px 6px 3px;
    background: rgb(197, 197, 253);
    color: darkblue;
    font-size: 10pt;
}

.ngs-start-advanced .Wt-panel .body {
    background: rgb(197, 197, 253);
    padding: 4px 6px 4px;
    -webkit-backface-visibility: hidden;
    clear: left;
}

.standard-margin {
  margin: 5px;
}

/* flex */
.flex-container {
  display: flex; /* or inline-flex */
  flex-flow: row wrap;
  justify-content: space-between;
  margin-bottom: 20px;
}

.flex-container-vertical {
    display: flex;
    flex-direction: column;
}

.flex-elem {
  flex: 5 0px; 
}

.flex-elem-auto {
    flex: 1 auto;
    align-self: flex-end;
}

.flex-elem-auto-center {
    flex: 1 auto;
    align-self: center;
}

.flex-elem-auto-top-3 {
    flex: 3 auto;
}

.flex-elem-stretch {
    flex-grow: 1;
}

.flex-justify-end {
    justify-content: flex-end;
}

.taxonomy-info-table td {
    padding-right: 10px;
    padding-bottom: 3px;
    border: 2px solid #f1f1f1;
}

.taxonomy-info-table th {
    text-align: center;
    border: 2px solid #f1f1f1;
    background-color: #f5f5f5;
}

.tool-taxonomy-support-label {
    color: green;
    font-weight: bold;
}
.tool-taxonomy-no-support-warning {
    display: block;
    margin-top: 20px;
    color: red;
    font-weight: bold;
    font-style: italic;
}

.radio-button-label {
  font-weight: normal;
  display: block;
}

.radio-button-label.radio-inline+.radio-inline {
  margin-left: 0px;
}

.radio-button-label.checkbox-inline+.checkbox-inline {
  margin-left: 0px;
}

.version {
  float: right;
  text-transform: none;
  font-family: arial;
  font-size: 70%;
  line-height: 34px;
  letter-spacing: normal;
}

.modal-header h4 {
  text-transform: none;
  font-family: inherit;
}

@media (max-width: 1200px) {
  .genotype-form .control-label {
    text-align: left;
  }

  .top-logo {
    width: 600px;
  }
}

.genotype-form .value {
  padding: 7px 12px 0px 12px;
}

.genotype-anchor-btn {
  cursor: pointer;
}

.navbar-brand {
  background-image: url("../style/logo-genome-detective-small.png");
}

@media (min-width: 992px) {
  .navbar-brand {
    background-image: url("../style/logo-genome-detective.png");
  }
}

.content-section {
  padding-top: 60px;
  padding-bottom: 60px;
}

.legend-container {
  text-align: center;
}

.discovery-assignment {
  font-style: italic;
  opacity: 0.6;
}

.waiting {
  opacity: 0.4;
}

.analysis-icon-container {
  display: inline-block;
  line-height: 60px;
  height: 50px;
  text-align: center;
  vertical-align: bottom;
  margin-right: 10px;
}

.size-stretch {
    width: 100%;
    height: 100%;
}

.tax-tree-species-label {
    font-weight: bold;
}

.result-distr-config {
    width: 100%;
    padding: 5px;
    border: 1px solid gray;
    border-radius: 2px;
    display: flex;
    flex-direction: column;
}

.result-distr-config .radio-buttons {
    margin-left: auto;
    margin-right: auto;
    margin-bottom: 5px;
}

.result-distr-config .form-horizontal .form-group {
    margin-bottom: 3px;
}

.genotype-msg-box .Wt-msgbox-text {
  display: block;
}

.fasta-ta {
  font-size: 75%;
  font-family: monospace;
}

.genome-image, .phylo-tree {
  margin-left: auto;
  margin-right: auto;
  display: block;
}

table.figtreelegend {
  width: auto;
}

li.login-menu-item a span {
    color: black;
}

.nav li.login-menu-item a:hover {
    background-color: transparent;
}

.remember-me-field .has-success .control-label {
    color: black;
}
.remember-me-field .has-success .help-block {
    color: #737373;
}

.phylo-tree {
  border: 1px solid #c4c4c4;
}

#krona-controls {
  position: absolute;
  padding-top: 25px;
  padding-left: 25px;
}

input#radiusDecrease, input#radiusIncrease {
  margin: 2px;
  font-size: 100%;
  font-weight: 600;
  height: 25px;
  width: 25px;
  background-color: #f5f5f5;
  border-radius: 2px;
  border: 1px solid #ddd;
} 

.sort-icon {
  float: right;
  width: 15px;
  height: 15px;
  cursor: pointer;
  position: absolute;
  top: 5px;
  right: 0;
}

h1 small {
  color: #c4c4c4;
}

.last-update-notice {
    font-size: 0.8em;
    font-style: italic;
	color: gray;
    margin-bottom: 15px;
}


.pdf-download {
  float: right;
}

.Wt-filedropzone {
    width: auto;
    min-width: 200px;
    height: auto;
    min-height: 100px;
    padding-bottom: 30px;

    text-align: center;
}

.upload-block {
    position: relative;
    width: 300px;
    height: auto;
    margin: 10px;
    border: 1px solid black;
    border-radius: 3px;

    background-color: #f5f5f5;
    text-align: left;
}
.upload-block.finished {
    background-color: #1eb6a7;
}
.upload-block.invalid,
 .upload-block.finished.invalid {
    background-color: red;
}
.upload-block .upload-block-filename {
    display: inline-block;
    max-width: 260px;
    line-height: 30px;
    margin-left: 5px;
}
.upload-block .fa-close {
    height: 30px;
    width: 30px;
    padding: 0px;

    position: absolute;
    top: 0px;
    right: 0px;

    background-color: rgba(0,0,0,0);
}
.upload-block .fa-close::after {
    background-color: rgba(0,0,0,0);
}
.upload-block .fa-close:active:focus {
    background-color: rgba(0,0,0,0);
    box-shadow: none;
    outline: none;
}

.upload-block.pair {
    width: 500px;
    height: 53px; /* +3px for border-radius */
}
.upload-block.pair.finished {
    height: 30px;
    background-color: #1eb6a7;
}
.upload-block .filename-block {
    line-height: 30px;
    padding-left: 5px;
    text-align: center;
    border-bottom: 1px solid black;
    border-bottom-style: dashed;
}
.upload-block.finished .filename-block {
    border-bottom: none;
}
.upload-block .progress-block1 {
    display: inline-block;
    position: absolute;
    bottom: 0px;
    left: 0px;

    height: 20px;
    width: 50%;
    border-right: 1px solid black;

    line-height: 20px;
    font-size: 10px;
    text-align: center;
}
.upload-block .progress-block2 {
    display: inline-block;
    position: absolute;
    bottom: 0px;
    right: 0px;

    height: 20px;
    width: 50%;

    line-height: 20px;
    font-size: 10px;
    text-align: center;
}

.upload-block .progress-block1.finished {
    background-color: #1eb6a7;
}
.upload-block .progress-block2.finished {
    background-color: #1eb6a7;
}

table.credit-table .last-row {
  border-top: 5px double #ddd;
  font-weight: bold;
}
table.credit-table .last-row td:nth-last-child(2){
  text-align: right;
}

table.credit-table tr td:last-child,
table.credit-table tr th:last-child {
  text-align: right;
}

.server-load {
  position: absolute;
  right: 0;
}

.server-load-float {
  float: right;
}

.light-server-load {
  color: #42f042;
  transform: rotate(90deg) !important;
}

.medium-server-load {
  color: #f06e42;
  transform: rotate(90deg) !important;
}

.heavy-server-load {
  color: #d51211;
  transform: rotate(90deg) !important;
}

.server-load-indicator {
  color: #0c4843;
  opacity: 0.5;
}

.navbar .dropdown-menu > li > a {
  color: #555555;
  font-family: "Righteous", cursive;
  font-weight: 400;
  text-transform: uppercase;
}

.stats-legend {
  font-size: 12px;
}

@media (max-width: 992px) {
  .container {
    width: auto;
  }

  .stats-table .concordance-col {
    width: 85px;
  }

  .stats-table .matches-col,
  .stats-table .identities-col {
    width: 100px;
  }
}

.bacteria-results .col-nbreads {
	min-width: 100px;
}
.bacteria-results .col-covpct {
	min-width: 110px;
}

.gene-table .partial-gene-alignment {
    color: red;
}
.selected-gene-row { /* copied from .Wt-itemview .active */
    color: #ffffff;
    text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.2);
    cursor: default;
    background-color: #428bca;
}


.slider-edit {
	display: table-cell;
	vertical-align: middle;
	padding-left: 10px;
}
.slider-text {
	display: table-cell;
    vertical-align: middle;
    padding-left: 10px;
    padding-bottom: 9px;
}

.pricing-table {
  width: 250px;
}
.text-right {
	text-align: right;
}

.order-table {
	width: 100%;
	table-layout: auto;
}
.order-table td, .order-table th{
	padding-right: 10px;
	border-bottom: 1px solid black;
}
.order-table tr td:last-child{
    width:1%;
    white-space:nowrap;
}

.stripe-pay-button {
    margin-top: 20.0px;
    width: 100%;
}

.order-pay-button {
    width: 100%;
}

.order-panel-header:hover {
    cursor: pointer;
    cursor: hand;
}

.stripe-image {
    height: 60px;
    display: block;
    margin: auto;
    margin-top: 10px;
}


.StripeElement, .StripeContainer .StripeElement {
  height: 40px;
  padding: 10px 12px;

  color: #32325d;
  background-color: white;
  border: 1px solid transparent;
  border-radius: 4px;

  box-shadow: 0 1px 3px 0 #e6ebf1;
  -webkit-transition: box-shadow 150ms ease;
  transition: box-shadow 150ms ease;
}

/*
.StripeElement, .StripeContainer .StripeElement {
    background-color: #fff;
    border: 1px solid #c7c7c7;
    border-radius: 3px;
    box-shadow: inset 0 1px 1px rgba(0,0,0,0.06);
    box-sizing: border-box;
    margin-bottom: 0.75em;
    padding: 0.5em;
    transition: border-color 150ms ease;
    width: 100%;
    display: block;
    font-family: "Roboto", "Helvetica Neue", Helvetica, Arial, sans-serif;
    font-size: 15px;
    line-height: inherit;
    color: inherit;
    font: inherit;
    margin: 0;
}
*/

.StripeElement--focus, .StripeElement:focus, .StripeContainer .StripeElement:focus{
  box-shadow: 0 1px 3px 0 #cfd7df;
}

.StripeElement--invalid {
  border-color: #fa755a;
}

.StripeElement--webkit-autofill {
  background-color: #fefde5 !important;
}