NGS Details (SRR3458562_Metagenome_example): Enterobacteria phage phi80

Assembly

329 (1 contig(s))
41.1
137
8.84 rpm (after QC)
0
de novo + reference guided assembly
Bcf Tools

Coverage Map

Variant Tables

Assignment

Enterobacteria phage phi80 (Taxonomy ID: 10713)
94.5289
0.0
0
63

Alignment

586.0 (NT) + 0.0 (AA) = 586.0
89.0578
Local, heuristic, nucleotide (BLASTN)

Alignment Detailed Statistics

BeginEndCoverageScoreConcordanceMatchesIdentitiesI/D/M/F*Stop Codons
NT23432237600.7%58689.1%329 (100%)311 (94.5%)0/0
Mutations:23445G>T, 23465C>T, 23473A>C, 23511G>A, 23535A>G, 23550G>A, 23553A>G, 23601T>C, 23613G>A, 23619A>G, 23628G>A, 23652G>A, 23655A>G, 23718A>T, 23733T>C, 23745C>T, 23746C>T, 23750C>A
CDS
Proteins
*: Inserts / Deletes / Misaligned / Frameshifts

Analysis details

This analysis was performed with panviral2.43