NGS Details (SRR3458562_Metagenome_example): Escherichia virus Lambda_2B8

Assembly

87 (1 contig(s))
1.0
1
0.06 rpm (after QC)
0
de novo + reference guided assembly
Bcf Tools

Coverage Map

Variant Tables

Assignment

Escherichia virus Lambda_2B8 (Taxonomy ID: 2686050)
100.0
100.0
0
66

Alignment

174.0 (NT) + 175.0 (AA) = 349.0
100.0
Local, heuristic, nucleotide (BLASTN)

Alignment Detailed Statistics

BeginEndCoverageScoreConcordanceMatchesIdentitiesI/D/M/F*Stop Codons
NT33621337070.2%174100%87 (100%)87 (100%)0/0
Mutations:none
CDS
305833.0%175100%29 (100%)29 (100%)0/0/0/00
Proteins
305833.0%175100%29 (100%)29 (100%)0/0/0/00
Protein mutations:none
Codon mutations:none
*: Inserts / Deletes / Misaligned / Frameshifts

Analysis details

This analysis was performed with panviral2.43