Version 2.14.5
Genome Detective Platform

NGS Details (SRR3458562_Metagenome_example): Feline coronavirus

Assembly

29320 (1 contig(s))
231.5
56712
3659.31 rpm (after QC)
0
de novo + reference guided assembly
Bcf Tools

Coverage Map

Variant Tables

Assignment

Feline coronavirus (Taxonomy ID: 12663)
93.3086
95.3938
7
9

Alignment

49495.0 (NT) + 61929.0 (AA) = 111424.0
91.7818
Local, heuristic, nucleotide (BLASTN)

Alignment Detailed Statistics

BeginEndCoverageScoreConcordanceMatchesIdentitiesI/D/M/F*Stop Codons
NT362935599.9%4949586.6%28856 (98.3%)26955 (91.8%)32/464
Mutations:112C>T, 119A>G, 122C>T, 150_151insTG, 159C>T, 195A>G, 250C>T, 352C>T, 364T>G, 387C>T, 388A>G, 389C>T, 400T>C, 411A>T, 436C>T, 470T>A, 472C>T, 496T>C, 508T>C, 514A>T, 560T>C, 562G>A, 565G>A, 568T>C, 571C>T, 580A>G, 583C>T, 620T>G, 622C>T, 634A>G, 640C>G, 652G>A, 655C>T, 673T>C, 682G>A, 691T>C, 728G>A, 736C>T, 751G>A, 754C>T, 760T>C, 763C>T, 767C>T, 772A>T, 793A>G, 796G>T, 808C>T, 811T>C, 835C>T, 841T>C, 871C>T, 877G>A, 897A>G, 898G>A, 901T>C, 907G>A, 916T>C, 940T>C, 952C>T, 955G>A, 967C>T, 984A>G, 987C>A, 1003T>C, 1006C>T, 1012T>C, 1015T>C, 1018C>T, 1021C>T, 1039C>T, 1063T>C, 1072C>G, 1096C>T, 1138A>G, 1147C>T, 1148A>G, 1151G>A, 1201A>G, 1253A>G, 1273T>C, 1276C>T, 1291T>C, 1317G>A, 1330T>C, 1333G>A, 1342A>G, 1360T>C, 1366C>T, 1369A>T, 1375A>G, 1406G>A, 1408A>G, 1432T>C, 1465A>G, 1467T>C, 1468G>A, 1502G>T, 1504T>G, 1525A>G, 1534T>A, 1564T>C, 1567T>C, 1576A>G, 1579A>T, 1585C>T, 1594T>A, 1624A>G, 1648T>A, 1672T>C, 1687A>G, 1690C>T, 1693C>T, 1717C>A, 1729A>G, 1741C>T, 1747G>T, 1777T>C, 1786T>C, 1796A>G, 1813T>C, 1822A>G, 1846T>C, 1855C>T, 1861T>A, 1867T>G, 1870T>C, 1871G>A, 1888A>G, 1889C>A, 1891G>A, 1898T>G, 1900A>T, 1904T>A, 1906C>T, 1912C>T, 1913C>T, 1927T>C, 1930C>T, 1939G>A, 1942T>A, 1947G>A, 1964A>G, 1969T>C, 1996A>G, 2002T>C, 2017C>T, 2044T>C, 2053C>G, 2056G>T, 2061T>C, 2062G>A, 2125A>T, 2137C>T, 2152C>T, 2158T>C, 2224G>A, 2246C>T, 2248A>G, 2269G>A, 2274A>G, 2275G>A, 2296C>T, 2308A>G, 2321C>A, 2325A>G, 2326A>C, 2332C>T, 2334G>A, 2405A>G, 2420A>C, 2434C>T, 2440G>A, 2467C>T, 2480G>A, 2485C>T, 2488T>G, 2491C>T, 2493A>C, 2494G>A, 2500T>C, 2501T>C, 2527C>T, 2542A>G, 2543G>A, 2554T>C, 2560C>T, 2563T>C, 2564T>C, 2566T>G, 2572T>C, 2581G>T, 2582A>G, 2590C>T, 2592A>G, 2593T>C, 2617A>G, 2686A>G, 2695C>T, 2723C>T, 2725C>T, 2766T>C, 2770T>C, 2779T>C, 2832A>G, 2863C>T, 2926A>G, 2935C>T, 2974C>T, 2980T>C, 2982A>T, 2988G>A, 2996G>A, 3022A>G, 3040G>A, 3070T>C, 3076C>T, 3082T>C, 3085A>G, 3090T>C, 3097C>G, 3106A>T, 3109G>A, 3127C>T, 3131A>G, 3136T>C, 3141A>G, 3163G>A, 3184C>T, 3187T>C, 3223T>C, 3244T>C, 3253C>T, 3270C>T, 3284G>A, 3286T>C, 3295A>G, 3298T>C, 3315T>C, 3345T>C, 3346T>C, 3352A>G, 3359A>G, 3360C>T, 3364A>T, 3369A>C, 3372A>C, 3375C>T, 3382T>C, 3384T>C, 3386T>G, 3387C>T, 3388A>G, 3391T>A, 3394A>T, 3403A>G, 3410T>G, 3416G>T, 3417T>C, 3418C>T, 3421T>C, 3427A>G, 3431_3505delTTTGTTGAACAAGTTTCGCTCGTAGAAGAAAATAATGTTTTAACTCCTGCTGTAAACCCTGATGAGCAACTTTCC, 3508A>T, 3515A>G, 3522A>T, 3529C>T, 3547G>A, 3555C>T, 3591C>A, 3598G>T, 3599A>T, 3601C>A, 3604A>T, 3607C>T, 3609A>G, 3613A>G, 3617A>G, 3634C>T, 3665A>G, 3667A>G, 3670C>T, 3682T>C, 3686T>C, 3694C>T, 3697T>C, 3709C>A, 3715T>C, 3716T>C, 3725G>A, 3726G>A, 3736A>T, 3738A>G, 3739T>C, 3745T>C, 3751T>C, 3757A>G, 3758G>A, 3760C>T, 3776C>A, 3778A>G, 3781T>C, 3784G>A, 3785A>C, 3795A>C, 3796T>C, 3799A>T, 3802G>A, 3811A>G, 3817T>C, 3856C>A, 3858C>T, 3859A>T, 3864G>A, 3865T>C, 3868T>C, 3884G>A, 3885T>A, 3901A>G, 3904A>G, 3905C>A, 3910T>C, 3919G>A, 3925A>T, 3928T>A, 3933G>A, 3970G>A, 3975T>C, 3976T>C, 3987A>G, 3988G>A, 3994T>A, 3997C>T, 4000G>A, 4006T>A, 4021T>C, 4030A>G, 4033T>A, 4042G>A, 4048T>A, 4052T>A, 4061A>G, 4067A>C, 4069A>G, 4073A>G, 4074C>T, 4075T>C, 4100A>C, 4168A>G, 4182A>G, 4198T>A, 4215A>C, 4229A>G, 4232T>C, 4242T>C, 4244G>A, 4247_4267delGAACCACCTGTGCCCGTAGAG, 4285C>A, 4306T>C, 4307A>T, 4310C>A, 4311T>C, 4315C>T, 4321T>C, 4322A>G, 4323A>C, 4324A>G, 4326C>T, 4327G>A, 4334G>A, 4336C>T, 4345C>T, 4361G>A, 4367A>G, 4375T>C, 4390C>T, 4391C>G, 4423C>T, 4426G>A, 4432C>T, 4440G>A, 4444T>C, 4452T>C, 4465T>C, 4476A>G, 4477A>C, 4485A>G, 4486G>A, 4489G>A, 4492C>T, 4503G>A, 4504C>T, 4507A>G, 4508G>T, 4543C>T, 4567G>A, 4594C>T, 4615C>T, 4636C>T, 4639T>C, 4648T>A, 4654G>A, 4658C>T, 4684C>T, 4699G>T, 4703G>A, 4704T>C, 4705T>A, 4708G>A, 4709T>C, 4718C>T, 4721C>A, 4730G>A, 4735A>T, 4741A>G, 4747A>G, 4756T>C, 4771A>T, 4778G>A, 4779T>C, 4801T>A, 4810T>C, 4813T>A, 4814A>G, 4819G>T, 4831T>C, 4837G>A, 4843A>C, 4846G>A, 4858A>G, 4882G>A, 4888C>T, 4894A>G, 4900T>C, 4912C>T, 4915A>G, 4921T>C, 4924T>C, 4930G>T, 4936A>T, 4938G>A, 4945A>T, 4948T>C, 4951C>T, 4961G>A, 4966T>C, 4972A>T, 4975G>A, 4979G>A, 4984T>C, 4989A>G, 4993T>A, 4994T>C, 4996C>T, 5017A>G, 5019C>T, 5035C>T, 5048G>C, 5111G>A, 5188A>C, 5196C>T, 5218A>C, 5239G>A, 5240G>A, 5247C>A, 5263C>T, 5269C>T, 5292T>G, 5296T>G, 5309G>A, 5320T>C, 5332C>T, 5356T>A, 5374A>T, 5377T>A, 5386A>G, 5399T>A, 5402G>A, 5404T>C, 5410C>A, 5421T>C, 5438C>A, 5439A>G, 5461C>T, 5462A>G, 5473T>C, 5478C>T, 5482C>T, 5491A>G, 5509T>A, 5512C>T, 5539C>T, 5542C>T, 5548T>G, 5557G>A, 5569T>C, 5581T>C, 5591G>A, 5608C>T, 5611T>G, 5626C>T, 5647C>T, 5659T>C, 5668T>C, 5676C>T, 5680C>A, 5683G>A, 5691A>T, 5692G>A, 5697T>A, 5699A>T, 5700T>C, 5709C>A, 5715C>T, 5719A>G, 5723T>C, 5727A>G, 5728A>C, 5729_5743delGCTAAAGAATCAAAT, 5745C>A, 5747G>A, 5749T>C, 5773A>G, 5775A>C, 5791T>G, 5792C>T, 5795A>G, 5797A>G, 5798G>C, 5799A>C, 5800A>T, 5812T>A, 5830T>C, 5840A>T, 5846C>T, 5864G>A, 5866A>G, 5876G>A, 5884T>C, 5888A>G, 5890T>A, 5902C>A, 5920T>C, 5921T>C, 5923A>G, 5929T>C, 5953T>A, 5966G>T, 5974A>C, 5983A>G, 5988T>C, 5994G>A, 5996A>G, 6001G>A, 6011G>A, 6016A>G, 6028T>C, 6032A>C, 6049A>T, 6055G>A, 6064C>T, 6065A>G, 6066T>C, 6077C>T, 6103T>C, 6106C>T, 6138A>G, 6142G>A, 6170A>G, 6190G>A, 6193G>A, 6208T>C, 6215T>C, 6220C>T, 6262T>C, 6271G>A, 6275T>G, 6277A>G, 6286C>T, 6298A>C, 6314A>G, 6325G>C, 6334A>G, 6337C>T, 6355C>T, 6371C>G, 6382T>C, 6386G>A, 6388C>T, 6391C>T, 6400T>C, 6410T>C, 6412A>G, 6418T>C, 6439C>T, 6469A>T, 6475T>C, 6497G>A, 6499G>A, 6536C>T, 6538A>T, 6547C>T, 6550C>T, 6553G>T, 6562G>A, 6565A>T, 6568T>C, 6589G>A, 6592C>T, 6598T>C, 6623A>C, 6634G>T, 6640C>T, 6667C>T, 6679C>T, 6700C>T, 6715T>C, 6733T>C, 6749C>G, 6761A>G, 6787T>C, 6790G>A, 6793A>G, 6796C>T, 6805C>T, 6820T>C, 6821A>T, 6823C>T, 6826C>T, 6829G>A, 6835T>C, 6841C>T, 6853A>C, 6868T>C, 6884C>A, 6886T>C, 6895T>C, 6899A>G, 6904G>A, 6907G>A, 6919A>T, 6925C>T, 6926C>T, 6934T>C, 6946T>C, 6949C>T, 6952C>T, 6961G>T, 6976T>C, 6979T>C, 6985C>T, 6988C>A, 6997C>T, 7030C>T, 7090C>T, 7111C>T, 7174C>T, 7192T>C, 7205A>G, 7209A>C, 7246A>G, 7276T>C, 7282T>C, 7309T>C, 7390C>A, 7393T>C, 7396G>A, 7402C>T, 7405C>T, 7406A>G, 7408T>A, 7450G>A, 7465T>C, 7489T>G, 7505C>T, 7510G>A, 7519G>A, 7531T>A, 7537G>T, 7555T>C, 7586C>A, 7590T>C, 7591C>T, 7598C>T, 7600T>G, 7603T>C, 7606G>T, 7614C>T, 7615C>T, 7616C>G, 7618T>G, 7624T>A, 7625T>C, 7643G>C, 7660T>C, 7715T>C, 7735C>T, 7744T>C, 7747T>C, 7774T>C, 7784C>T, 7858A>G, 7867T>C, 7876T>A, 7879G>A, 7933C>T, 7939T>C, 7960T>A, 7981T>C, 7999T>C, 8007A>G, 8014G>A, 8020T>C, 8027A>T, 8032C>T, 8033A>C, 8047C>T, 8102C>A, 8125T>C, 8143A>T, 8153G>T, 8158T>C, 8165A>G, 8168T>C, 8174C>T, 8226C>T, 8230A>C, 8251C>T, 8272C>T, 8278T>C, 8290A>C, 8296T>G, 8314C>T, 8315A>G, 8318T>A, 8326C>T, 8338G>T, 8353T>C, 8359T>C, 8390T>A, 8402G>A, 8404T>C, 8413C>T, 8416A>G, 8425A>G, 8476C>T, 8482A>T, 8501T>C, 8503G>T, 8521A>T, 8539C>T, 8555G>A, 8557T>C, 8566C>T, 8575T>C, 8578C>T, 8585A>C, 8587A>G, 8593T>C, 8602A>T, 8605T>C, 8606G>A, 8609T>C, 8617G>A, 8620G>A, 8623C>T, 8629C>T, 8636T>G, 8647C>T, 8659T>G, 8665T>G, 8671T>C, 8672A>G, 8678G>A, 8684C>T, 8686T>C, 8689T>C, 8692T>C, 8719A>G, 8722A>T, 8728A>G, 8740A>G, 8764C>T, 8812A>G, 8858A>G, 8859A>C, 8860C>A, 8863C>T, 8875T>C, 8887T>C, 8893G>A, 8902G>A, 8923C>T, 8926C>T, 8944G>A, 8959T>C, 8962T>C, 8974T>C, 8983T>C, 9016G>A, 9019G>A, 9025A>G, 9029A>C, 9049T>C, 9053G>A, 9056G>A, 9058G>T, 9064C>T, 9079G>A, 9085T>C, 9088C>T, 9127C>T, 9142C>T, 9178T>C, 9214T>C, 9234C>T, 9259A>G, 9265G>A, 9271A>G, 9283T>C, 9289G>A, 9298A>T, 9301C>T, 9304T>C, 9313A>G, 9328A>G, 9331C>T, 9382C>T, 9391C>A, 9400T>G, 9407A>C, 9409A>G, 9412T>C, 9424C>T, 9430T>C, 9436T>C, 9448C>T, 9469A>G, 9470T>C, 9493C>T, 9526T>C, 9549A>T, 9580G>A, 9655T>C, 9658T>C, 9682C>T, 9683A>T, 9692A>T, 9727T>C, 9754T>C, 9763T>C, 9772T>C, 9865T>C, 9866C>T, 9874C>T, 9926A>G, 9944A>C, 9956A>G, 9988C>T, 10000C>T, 10049G>A, 10072A>G, 10081G>A, 10099A>G, 10141T>C, 10142A>G, 10159T>C, 10174T>C, 10199G>T, 10201G>C, 10213C>T, 10222C>A, 10237C>T, 10246G>A, 10264G>T, 10287T>C, 10290G>A, 10303T>C, 10333G>A, 10346A>G, 10369C>T, 10412T>A, 10420G>A, 10465G>A, 10484G>A, 10485C>T, 10492C>T, 10496G>T, 10552C>T, 10565G>A, 10594T>C, 10597A>G, 10606T>C, 10615T>C, 10684C>T, 10729T>G, 10779G>A, 10810T>C, 10834A>G, 10849C>T, 10852T>C, 10945C>T, 10947C>T, 10948C>T, 10954C>T, 11041C>T, 11044C>T, 11062A>G, 11077T>A, 11080T>C, 11116C>A, 11176G>A, 11179T>A, 11188C>T, 11197C>T, 11200A>G, 11212A>G, 11218C>A, 11272A>G, 11282G>A, 11329C>T, 11341C>T, 11371C>T, 11410C>T, 11482G>A, 11529A>C, 11530G>A, 11557C>T, 11566A>G, 11612A>T, 11650A>G, 11677A>G, 11707C>T, 11740T>C, 11747G>T, 11866A>T, 11869T>A, 11890T>C, 11896T>C, 11962G>A, 11969C>T, 12008G>A, 12019A>G, 12022G>A, 12061C>T, 12091C>T, 12097T>C, 12136T>C, 12145T>C, 12148C>T, 12155T>G, 12169G>A, 12172C>T, 12184C>T, 12187A>T, 12190T>A, 12193A>T, 12199T>C, 12202T>C, 12205T>C, 12211T>C, 12217A>T, 12223T>C, 12229A>T, 12239T>C, 12241G>A, 12249T>A, 12256T>C, 12259A>G, 12265C>G, 12269G>A, 12277C>T, 12280G>C, 12283T>C, 12286G>A, 12292T>A, 12296A>C, 12298A>T, 12322C>T, 12325C>T, 12328T>C, 12331C>T, 12334T>C, 12337C>T, 12345C>A, 12346T>C, 12355T>C, 12361T>C, 12376A>G, 12379A>G, 12380G>A, 12382C>T, 12383A>T, 12385C>T, 12389A>G, 12492C>T, 12495T>C, 12507A>G, 12531C>A, 12540C>A, 12541C>A, 12543T>A, 12555A>G, 12577G>A, 12579A>T, 12585G>A, 12594T>A, 12599G>C, 12645A>T, 12650T>C, 12651A>T, 12660A>G, 12673T>A, 12674T>A, 12675G>C, 12678T>C, 12684A>G, 12688C>A, 12696A>G, 12716A>G, 12718G>A, 12747G>T, 12762G>A, 12765C>T, 12792T>C, 12804T>C, 12811T>G, 12819C>T, 12824A>C, 12829T>G, 12830C>A, 12831T>A, 12843T>C, 12846G>A, 12864A>T, 12876T>C, 12882T>C, 12888A>T, 12891C>T, 12896G>A, 12906T>C, 12909A>T, 12918C>T, 12936A>T, 12939G>T, 12945T>C, 12951T>A, 12954T>A, 12966T>C, 12969C>T, 12984T>A, 12990T>C, 12993C>T, 13014T>C, 13026T>A, 13032T>C, 13035A>G, 13041A>T, 13042A>G, 13044G>T, 13056A>T, 13059T>C, 13065C>T, 13095C>T, 13116T>C, 13131T>C, 13156G>T, 13173C>T, 13194C>T, 13197G>T, 13200C>A, 13203C>T, 13209A>G, 13210A>T, 13212A>C, 13221T>A, 13227T>C, 13234C>T, 13242T>G, 13245A>C, 13251C>T, 13254C>T, 13257T>A, 13263C>T, 13275A>T, 13281T>C, 13287C>T, 13314G>A, 13323A>T, 13329C>A, 13335T>A, 13337G>T, 13338T>G, 13341C>A, 13509T>C, 13629C>T, 13704C>T, 13710G>A, 13734T>C, 13737C>T, 13791A>G, 13809T>C, 13818C>T, 13821C>T, 13866C>T, 13878T>C, 14026A>C, 14040A>G, 14166C>T, 14175T>C, 14184G>A, 14202C>T, 14217G>A, 14241T>C, 14268T>C, 14340C>T, 14382C>T, 14406T>C, 14442C>T, 14445T>A, 14496C>A, 14523T>C, 14532G>A, 14694T>C, 14742T>C, 14787C>T, 14808T>C, 14814A>G, 14832A>T, 14862C>T, 14868C>T, 14874T>C, 14901T>C, 14949A>G, 15015C>T, 15063C>T, 15150A>G, 15174T>C, 15246G>T, 15258T>C, 15282C>T, 15285G>A, 15399G>A, 15400T>C, 15429C>T, 15441G>A, 15462T>C, 15468G>A, 15522C>T, 15672T>C, 15714T>G, 15792C>T, 15810G>T, 15823C>T, 15825T>G, 15939C>T, 15996A>G, 16032G>A, 16057T>C, 16113C>T, 16117C>T, 16143C>T, 16200A>G, 16221T>C, 16255C>T, 16287C>T, 16347T>C, 16368C>A, 16374A>G, 16377A>G, 16386T>A, 16399C>T, 16453G>A, 16479C>T, 16485T>C, 16536T>G, 16545C>T, 16620C>T, 16662G>A, 16669G>T, 16674C>T, 16692A>G, 16695T>C, 16719C>T, 16758G>A, 16761G>A, 16770C>T, 16800T>C, 16803C>T, 16818C>T, 16851C>T, 16903A>C, 16944C>T, 16962G>A, 16986G>A, 17001A>G, 17007C>T, 17049T>C, 17052G>A, 17055C>T, 17061T>C, 17080T>C, 17103G>A, 17169C>T, 17187T>G, 17193C>T, 17226T>C, 17232C>T, 17280T>C, 17310T>C, 17334C>T, 17412T>C, 17499T>C, 17508T>C, 17574A>T, 17592T>C, 17628C>T, 17682T>C, 17688C>T, 17709G>A, 17721C>T, 17724G>T, 17742T>C, 17832C>T, 17862C>T, 17895T>G, 17920T>C, 17949T>C, 17964C>T, 17970C>A, 17991A>T, 18003T>C, 18012T>C, 18015T>A, 18054C>T, 18057T>C, 18082C>T, 18084T>A, 18090A>G, 18102C>T, 18126T>C, 18141A>G, 18159C>A, 18166C>T, 18204A>C, 18336A>G, 18357G>A, 18399T>C, 18423T>C, 18426C>T, 18444C>T, 18450G>A, 18474C>T, 18480C>T, 18486T>G, 18543C>T, 18565A>G, 18567T>C, 18606C>T, 18627A>G, 18654T>C, 18684C>T, 18688C>T, 18699A>G, 18702C>T, 18762C>T, 18765A>G, 18780C>T, 18792A>G, 18795C>T, 18798C>T, 18853G>T, 18854T>C, 18891A>G, 18894C>T, 18932A>G, 19044C>T, 19050G>T, 19083T>G, 19173C>T, 19215C>T, 19218C>T, 19254G>A, 19304C>A, 19386C>T, 19551C>T, 19637G>A, 19665T>C, 19735C>T, 19785G>A, 19827C>T, 19935T>C, 19944A>G, 19953C>T, 19962C>T, 19986T>C, 20033C>T, 20130G>C, 20133A>G, 20199T>C, 20262T>C, 20277C>T, 20289T>C, 20307T>C, 20352C>T, 20379A>G, 20457C>A, 20459C>T, 20462G>A, 20471T>C, 20483A>T, 20488T>C, 20495A>G, 20496A>T, 20501T>C, 20507A>T, 20510C>T, 20512T>G, 20534G>A, 20555C>T, 20561T>C, 20565C>T, 20571A>C, 20572G>A, 20573T>A, 20575A>G, 20576C>T, 20593G>T, 20651T>A, 20652C>A, 20653G>C, 20654A>T, 20657T>C, 20665T>A, 20667C>G, 20701T>A, 20711C>T, 20732T>C, 20747A>T, 20748T>C, 20762G>T, 20771G>A, 20781G>A, 20783T>C, 20786T>C, 20789_20790insTATATA, 20792G>A, 20799A>G, 20822C>A, 20829A>G, 20841G>T, 20849A>T, 20862C>A, 20868A>G, 20874G>A, 20876A>C, 20877C>A, 20878A>C, 20879A>C, 20886T>A, 20887C>G, 20898A>G, 20905C>T, 20916G>A, 20917C>A, 20950C>G, 20954C>T, 20975T>G, 20993C>A, 21005T>G, 21027C>A, 21029C>T, 21031T>G, 21043C>A, 21047T>C, 21086C>T, 21092T>C, 21095C>A, 21099G>C, 21101A>C, 21102T>C, 21118C>T, 21171C>T, 21188A>T, 21194A>G, 21204C>T, 21218T>C, 21221T>C, 21224C>T, 21230A>C, 21239G>A, 21242A>T, 21243T>G, 21244C>T, 21245A>G, 21248T>A, 21287C>T, 21302T>C, 21323G>A, 21335T>C, 21342T>C, 21347G>A, 21348A>G, 21353T>C, 21359G>A, 21413A>G, 21422C>T, 21425A>G, 21430A>G, 21437G>A, 21455G>A, 21473C>T, 21485T>C, 21503T>C, 21518A>G, 21524A>G, 21525C>T, 21536A>G, 21568G>A, 21592C>T, 21611C>T, 21629C>T, 21638A>G, 21674A>G, 21695C>T, 21775G>A, 21791T>C, 21805T>A, 21842T>C, 21848A>G, 21875T>C, 21884T>G, 21920A>G, 21977A>G, 21980A>T, 21984T>C, 21986C>T, 21989T>G, 22015G>T, 22023A>G, 22026T>C, 22028C>T, 22035G>A, 22066T>G, 22070T>C, 22091C>A, 22094G>A, 22098C>T, 22109C>T, 22130C>T, 22133T>C, 22136T>A, 22163A>G, 22166C>T, 22184C>T, 22186C>T, 22190C>T, 22193A>G, 22226C>A, 22244G>T, 22247T>C, 22262A>G, 22307G>A, 22346T>C, 22352T>C, 22370T>C, 22394G>A, 22442G>T, 22508T>G, 22511C>T, 22549G>A, 22571T>C, 22637T>C, 22649G>A, 22664C>T, 22738C>A, 22742T>C, 22751G>A, 22787C>T, 22792G>A, 22845G>A, 22862T>C, 22916C>T, 22945A>C, 22964T>C, 22970T>C, 22985T>C, 23006T>C, 23042T>C, 23084G>T, 23105A>G, 23162T>C, 23165C>T, 23168G>T, 23225T>C, 23248G>A, 23265C>T, 23274C>T, 23282T>C, 23288A>G, 23316G>C, 23333T>C, 23348A>G, 23357A>T, 23399T>A, 23408C>T, 23417A>C, 23423G>A, 23456T>G, 23457C>T, 23462A>T, 23476C>A, 23504A>T, 23523T>C, 23549G>T, 23573A>T, 23576G>A, 23627A>G, 23678T>A, 23684T>C, 23715C>A, 23726C>A, 23741G>A, 23789T>C, 23795T>A, 23834T>C, 23906T>A, 23957A>G, 23987A>G, 24011G>A, 24014T>C, 24017G>A, 24029C>T, 24053T>C, 24065A>T, 24107A>G, 24119A>G, 24144T>C, 24179C>T, 24200G>A, 24221T>C, 24245C>T, 24271T>C, 24302A>G, 24308T>C, 24326C>T, 24329G>A, 24341T>C, 24374T>C, 24380A>G, 24392C>T, 24434T>G, 24449C>T, 24494G>A, 24515T>C, 24518C>T, 24521T>C, 24524A>T, 24548T>C, 24557T>C, 24560T>C, 24632G>A, 24638T>C, 24648G>A, 24666C>T, 24682T>G, 24686C>T, 24713T>C, 24737A>G, 24785T>C, 24798T>C, 24802G>A, 24804T>A, 24805A>T, 24807G>A, 24807_24808insTAGCAGTTGTTTCTGCTA, 24810T>G, 24811G>A, 24812T>A, 24814G>T, 24821T>C, 24823C>T, 24842T>G, 24848T>C, 24854G>A, 24866C>T, 24886T>C, 24889T>C, 24917C>T, 24935A>T, 25013C>T, 25019G>A, 25041T>A, 25076G>A, 25083T>A, 25098A>G, 25113T>C, 25117C>T, 25134A>G, 25157G>A, 25170A>G, 25171_25182delAGTGTTACAAAA, 25186_25282delGTAAAGAGAGATTATAGAAAAATTGCCATTCTAAATTCCATGCGAAAATGATTGGTGGACTTTTTCTTAACACTCTTAGTTTTGTAATTGTTAGTAA, 25301C>T, 25317A>T, 25328T>A, 25332A>C, 25333A>G, 25353T>C, 25355G>A, 25379T>C, 25385C>T, 25497G>A, 25502G>A, 25529C>T, 25549T>C, 25572T>G, 25609C>T, 25610C>T, 25775A>C, 25815T>G, 25826T>C, 25850A>T, 25876C>T, 25897C>T, 25965T>C, 25974T>G, 25978A>G, 25990C>A, 25995C>A, 26001T>C, 26002G>A, 26007C>T, 26008G>A, 26011T>A, 26013C>T, 26020C>T, 26034T>C, 26046G>A, 26051C>T, 26068G>A, 26070T>A, 26076A>G, 26077T>C, 26079G>A, 26100G>A, 26103T>A, 26105A>G, 26106G>A, 26109T>A, 26110A>G, 26115A>C, 26116G>A, 26118A>T, 26119C>G, 26121A>T, 26127A>G, 26129G>A, 26130C>A, 26136A>T, 26139T>C, 26153C>A, 26154C>T, 26157T>C, 26162A>G, 26165C>T, 26166C>T, 26169G>A, 26175T>C, 26178T>C, 26184C>T, 26191T>C, 26193T>C, 26194T>C, 26196G>T, 26219_26221delTAC, 26228C>T, 26234C>T, 26236C>A, 26243A>G, 26244T>C, 26246A>G, 26260T>C, 26263T>G, 26266A>G, 26266_26267insCAAATA, 26267C>A, 26269C>G, 26278C>T, 26287C>G, 26289G>C, 26293C>T, 26297C>T, 26298A>C, 26299G>A, 26303A>C, 26304T>G, 26305T>C, 26311C>T, 26315A>G, 26316A>C, 26317T>A, 26320A>T, 26321A>G, 26322G>A, 26323A>T, 26327C>G, 26329A>G, 26330A>T, 26332C>A, 26338T>C, 26339G>A, 26341A>T, 26342C>G, 26344T>A, 26368T>A, 26390G>A, 26401T>C, 26413A>G, 26416G>T, 26417T>C, 26428C>T, 26434A>T, 26447C>T, 26452T>G, 26470G>T, 26473C>T, 26498C>T, 26500A>G, 26503G>T, 26527T>G, 26530G>A, 26533C>T, 26534C>G, 26587G>A, 26621G>A, 26638A>G, 26662T>C, 26668G>A, 26692T>C, 26695A>G, 26707T>C, 26713G>T, 26714C>T, 26716T>G, 26720T>C, 26722A>T, 26728T>C, 26731T>A, 26734T>C, 26737A>G, 26746C>T, 26749T>C, 26752T>G, 26785C>T, 26801T>C, 26803A>C, 26809C>T, 26812G>A, 26818G>A, 26842A>G, 26847G>A, 26863T>C, 26884A>G, 26902A>G, 26917C>T, 26932T>C, 26962C>T, 27010T>C, 27011C>T, 27061A>G, 27110T>C, 27112G>T, 27117T>A, 27120A>T, 27130T>C, 27139A>C, 27148T>A, 27151A>G, 27160T>C, 27176C>T, 27187A>G, 27202G>A, 27211A>G, 27217T>C, 27226T>C, 27233A>G, 27234T>C, 27235T>G, 27241T>C, 27244T>C, 27250A>C, 27256C>A, 27263A>G, 27264A>T, 27272G>C, 27277G>A, 27280G>A, 27289T>C, 27313T>C, 27322T>C, 27328C>T, 27331A>G, 27333A>C, 27334C>T, 27343T>C, 27346A>T, 27385C>A, 27389A>T, 27391G>A, 27412T>C, 27415C>T, 27432G>A, 27436T>C, 27451G>A, 27457G>A, 27460T>C, 27493A>C, 27505T>C, 27553C>A, 27556T>G, 27573A>C, 27592T>C, 27605G>C, 27628A>G, 27647C>T, 27650A>G, 27662G>C, 27664T>G, 27670A>G, 27671C>T, 27673T>C, 27721T>C, 27727C>T, 27733A>T, 27744C>A, 27863A>C, 27919C>T, 27927C>A, 27928C>T, 27931C>T, 27943G>A, 27958T>C, 27961T>C, 27982C>T, 27988C>T, 27994A>T, 28029G>A, 28066G>A, 28082_28084delGTG, 28129T>C, 28138T>A, 28163C>T, 28164G>C, 28256T>C, 28259A>G, 28265C>T, 28295T>C, 28301T>A, 28307T>C, 28310T>C, 28313G>A, 28346T>C, 28376G>A, 28461C>T, 28474A>G, 28525A>C, 28526A>C, 28545C>A, 28548T>C, 28554C>T, 28560T>C, 28563A>G, 28566A>G, 28569G>A, 28575C>T, 28576A>G, 28578A>T, 28582C>A, 28584T>C, 28590C>T, 28596T>C, 28599A>C, 28623G>T, 28629A>G, 28632T>A, 28638T>G, 28648G>A, 28651A>G, 28653C>T, 28656A>T, 28672T>C, 28687G>A, 28690C>T, 28716C>T, 28743A>C, 28749A>G, 28768A>G, 28769G>T, 28773G>A, 28784G>A, 28800G>A, 28833T>A, 28834G>C, 28836T>G, 28837G>A, 28840_29010delTGTCATACATCATTTGCTGTTGATCTTCCATTTGGGATTCAGATATACCATGACAGGGATTTTCAACACCCTGTTGATGGCAGACATCTAGATTGTACTCACAGAGTGTACTTTGTGAAGTACTGTCCACATAACCTGCATGGTTATTGCTTTAATGAGAGGCTGAAAGTT, 29014G>A, 29016C>G, 29017_29083delTTGAAGCAATTCAGAAGCAAGAAGGTCTTCGACAAAATCAACCAACATCATAAAACTGAGTTATAAG, 29096C>T, 29123G>T, 29137C>T, 29171A>G, 29189T>C
CDS
16710100%4537297.1%6673 (99.4%)6398 (95.4%)0/37/0/01
Protein mutations:A26V (387C>T 388A>G), Y34F (411A>T), C54S (470T>A 472C>T), F104V (620T>G 622C>T), V140I (728G>A), W162C (796G>T), K196R (897A>G 898G>A), N225S (984A>G), T226K (987C>A), I280V (1148A>G), V281I (1151G>A), T315A (1253A>G), R336K (1317G>A), A366T (1406G>A 1408A>G), M386T (1467T>C 1468G>A), A398S (1502G>T 1504T>G), S496G (1796A>G), V521I (1871G>A), S530A (1898T>G 1900A>T), Y532N (1904T>A 1906C>T), G546E (1947G>A), I552V (1964A>G), V584A (2061T>C 2062G>A), K655R (2274A>G 2275G>A), Q672R (2325A>G 2326A>C), G675D (2334G>A), T699A (2405A>G), I704L (2420A>C), A724T (2480G>A), K728T (2493A>C 2494G>A), V745I (2543G>A), F752L (2564T>C 2566T>G), I758V (2582A>G), N761S (2592A>G 2593T>C), L805F (2723C>T 2725C>T), I819T (2766T>C), D841G (2832A>G), N891I (2982A>T), R893K (2988G>A), E896K (2996G>A), I927T (3090T>C), E932D (3106A>T), K941E (3131A>G), K944R (3141A>G), A987V (3270C>T), D992N (3284G>A 3286T>C), L1002S (3315T>C), I1012T (3345T>C 3346T>C), T1017V (3359A>G 3360C>T), D1020A (3369A>C), D1021A (3372A>C), A1022V (3375C>T), V1025A (3384T>C), S1026V (3386T>G 3387C>T 3388A>G), S1034A (3410T>G), V1036S (3416G>T 3417T>C 3418C>T), F1041_S1065del (3431_3505delTTTGTTGAACAAGTTTCGCTCGTAGAAGAAAATAATGTTTTAACTCCTGCTGTAAACCCTGATGAGCAACTTTCC), K1069E (3515A>G), D1071V (3522A>T), A1082V (3555C>T), P1094H (3591C>A), L1096F (3598G>T), T1097S (3599A>T 3601C>A), K1100R (3609A>G), N1103D (3617A>G), I1119V (3665A>G 3667A>G), N1133K (3709C>A), G1139N (3725G>A 3726G>A), K1142N (3736A>T), D1143G (3738A>G 3739T>C), D1150N (3758G>A 3760C>T), L1156M (3776C>A 3778A>G), K1159Q (3785A>C), D1162A (3795A>C 3796T>C), T1183I (3858C>T 3859A>T), S1185N (3864G>A 3865T>C), V1192N (3884G>A 3885T>A), R1208K (3933G>A), I1222T (3975T>C 3976T>C), K1226R (3987A>G 3988G>A), S1248T (4052T>A), I1251V (4061A>G), T1253P (4067A>C 4069A>G), T1255V (4073A>G 4074C>T 4075T>C), T1264P (4100A>C), K1291R (4182A>G), N1302T (4215A>C), K1307E (4229A>G), S1308P (4232T>C), M1311T (4242T>C), V1312I (4244G>A), E1313_E1319del (4247_4267delGAACCACCTGTGCCCGTAGAG), D1325E (4285C>A), I1333L (4307A>T), L1334T (4310C>A 4311T>C), K1338A (4322A>G 4323A>C 4324A>G), A1339V (4326C>T 4327G>A), V1342I (4334G>A 4336C>T), V1351I (4361G>A), I1353V (4367A>G), L1361V (4391C>G), R1377K (4440G>A), V1381A (4452T>C), K1389S (4476A>G 4477A>C), K1392R (4485A>G 4486G>A), S1398N (4503G>A 4504C>T), A1400S (4508G>T), D1446E (4648T>A), V1465T (4703G>A 4704T>C 4705T>A), L1471I (4721C>A), V1474I (4730G>A), Q1487H (4771A>T), V1490T (4778G>A 4779T>C), N1497K (4801T>A), I1502V (4814A>G), K1503N (4819G>T), Q1511H (4843A>C), Q1540H (4930G>T), S1543N (4938G>A), V1551I (4961G>A), V1557I (4979G>A), N1560S (4989A>G), Y1562H (4994T>C 4996C>T), A1570V (5019C>T), E1580Q (5048G>C), V1601I (5111G>A), T1629M (5196C>T), G1644S (5240G>A), T1646K (5247C>A), V1661G (5292T>G), D1662E (5296T>G), D1667N (5309G>A), L1697M (5399T>A), V1698I (5402G>A 5404T>C), I1704T (5421T>C), H1710S (5438C>A 5439A>G), I1718V (5462A>G), A1723V (5478C>T), G1761S (5591G>A), D1767E (5611T>G), A1789V (5676C>T), N1790K (5680C>A), K1794I (5691A>T 5692G>A), I1796N (5697T>A), M1797S (5699A>T 5700T>C), T1800N (5709C>A), A1802V (5715C>T), S1805P (5723T>C), K1806S (5727A>G 5728A>C), A1807_N1811del (5729_5743delGCTAAAGAATCAAAT), T1812K (5745C>A), A1813T (5747G>A 5749T>C), N1822T (5775A>C), R1828C (5792C>T), K1829E (5795A>G 5797A>G), E1830P (5798G>C 5799A>C 5800A>T), T1844S (5840A>T), L1846F (5846C>T), V1852M (5864G>A 5866A>G), A1856T (5876G>A), I1860V (5888A>G 5890T>A), V1886F (5966G>T), V1893A (5988T>C), R1895K (5994G>A), N1896D (5996A>G), V1901I (6011G>A), I1919A (6065A>G 6066T>C), K1943R (6138A>G), S1954G (6170A>G), S1989A (6275T>G 6277A>G), I2002V (6314A>G), I2008M (6334A>G), L2021V (6371C>G), V2026I (6386G>A 6388C>T), V2063I (6497G>A 6499G>A), L2076F (6536C>T 6538A>T), M2105L (6623A>C), L2147V (6749C>G), I2151V (6761A>G), T2171S (6821A>T 6823C>T), E2181D (6853A>C), H2192N (6884C>A 6886T>C), S2197G (6899A>G), I2299V (7205A>G), N2300T (7209A>C), T2366A (7406A>G 7408T>A), L2426I (7586C>A), F2427S (7590T>C 7591C>T), L2432F (7606G>T), T2435I (7614C>T 7615C>T), L2436V (7616C>G 7618T>G), V2445L (7643G>C), S2469P (7715T>C), H2492Y (7784C>T), N2566S (8007A>G), T2573S (8027A>T), I2575L (8033A>C), L2598M (8102C>A), A2615S (8153G>T), S2619G (8165A>G), F2620L (8168T>C), T2639I (8226C>T), E2640D (8230A>C), T2669A (8315A>G), L2670M (8318T>A), L2694M (8390T>A), V2698I (8402G>A 8404T>C), V2749I (8555G>A 8557T>C), V2766I (8606G>A), L2776V (8636T>G), I2788V (8672A>G), V2790M (8678G>A), L2792F (8684C>T 8686T>C), N2850A (8858A>G 8859A>C 8860C>A), V2915I (9053G>A), V2916I (9056G>A 9058G>T), A2975V (9234C>T), E3080V (9549A>T), T3125S (9683A>T), T3128S (9692A>T), S3206G (9926A>G), I3212L (9944A>C), M3216V (9956A>G), V3247I (10049G>A), I3278V (10142A>G), V3297F (10199G>T 10201G>C), I3326T (10287T>C), C3327Y (10290G>A), I3346V (10346A>G), F3368I (10412T>A), A3392I (10484G>A 10485C>T), V3396F (10496G>T), V3419I (10565G>A), G3490E (10779G>A), A3546V (10947C>T 10948C>T), A3658T (11282G>A), E3740A (11529A>C 11530G>A), I3768L (11612A>T), G3813C (11747G>T), D3853E (11869T>A), G3900S (12008G>A), S3949A (12155T>G), F3980Y (12249T>A), V3987I (12269G>A), T4012N (12345C>A 12346T>C), I4022M (12376A>G), G4024S (12380G>A 12382C>T), T4025S (12383A>T 12385C>T), I4027V (12389A>G), V4090I (12577G>A 12579A>T), S4097T (12599G>C), V4114A (12650T>C 12651A>T), L4122N (12673T>A 12674T>A 12675G>C), K4136R (12716A>G), D4137N (12718G>A), L4168V (12811T>G), N4172T (12824A>C), S4174E (12829T>G 12830C>A 12831T>A), R4196K (12896G>A), T4245A (13042A>G 13044G>T), A4283S (13156G>T), D4297E (13200C>A), K4301Y (13210A>T 13212A>C), H4304Q (13221T>A), H4309Y (13234C>T), D4311E (13242T>G), S4343M (13337G>T 13338T>G), V5382M (16453G>A), A5454S (16669G>T), M5805I (17724G>T), T6086A (18565A>G 18567T>C), V6182S (18853G>T 18854T>C), N6208S (18932A>G), E6247D (19050G>T), H6258Q (19083T>G), T6332N (19304C>A), R6443K (19637G>A), A6575V (20033C>T)
Codon mutations:TAC14TAT (352C>T), GTT18GTG (364T>G), GCA26GTG (387C>T 388A>G), CTG27TTG (389C>T), ATT30ATC (400T>C), TAC34TTC (411A>T), GTC42GTT (436C>T), TGC54AGT (470T>A 472C>T), ATT62ATC (496T>C), GGT66GGC (508T>C), GGA68GGT (514A>T), TTG84CTA (560T>C 562G>A), CAG85CAA (565G>A), GGT86GGC (568T>C), TTC87TTT (571C>T), AGA90AGG (580A>G), GCC91GCT (583C>T), TTC104GTT (620T>G 622C>T), GGA108GGG (634A>G), GGC110GGG (640C>G), GTG114GTA (652G>A), GAC115GAT (655C>T), GCT121GCC (673T>C), AAG124AAA (682G>A), ATT127ATC (691T>C), GTT140ATT (728G>A), ATC142ATT (736C>T), GAG147GAA (751G>A), TAC148TAT (754C>T), TGT150TGC (760T>C), GCC151GCT (763C>T), CTA153TTA (767C>T), ACA154ACT (772A>T), TTA161TTG (793A>G), TGG162TGT (796G>T), CTC166CTT (808C>T), CTT167CTC (811T>C), AAC175AAT (835C>T), GAT177GAC (841T>C), ATC187ATT (871C>T), GAG189GAA (877G>A), AAG196AGA (897A>G 898G>A), AAT197AAC (901T>C), AAG199AAA (907G>A), CTT202CTC (916T>C), TAT210TAC (940T>C), GGC214GGT (952C>T), TCG215TCA (955G>A), GGC219GGT (967C>T), AAC225AGC (984A>G), ACG226AAG (987C>A), CTT231CTC (1003T>C), CAC232CAT (1006C>T), ATT234ATC (1012T>C), GCT235GCC (1015T>C), GCC236GCT (1018C>T), ACC237ACT (1021C>T), GGC243GGT (1039C>T), GAT251GAC (1063T>C), GGC254GGG (1072C>G), CTC262CTT (1096C>T), CCA276CCG (1138A>G), GCC279GCT (1147C>T), ATT280GTT (1148A>G), GTC281ATC (1151G>A), GTA297GTG (1201A>G), ACT315GCT (1253A>G), ACT321ACC (1273T>C), GTC322GTT (1276C>T), TTT327TTC (1291T>C), AGA336AAA (1317G>A), ACT340ACC (1330T>C), TCG341TCA (1333G>A), TCA344TCG (1342A>G), GCT350GCC (1360T>C), ATC352ATT (1366C>T), ACA353ACT (1369A>T), GAA355GAG (1375A>G), GCA366ACG (1406G>A 1408A>G), AAT374AAC (1432T>C), AAA385AAG (1465A>G), ATG386ACA (1467T>C 1468G>A), GCT398TCG (1502G>T 1504T>G), GAA405GAG (1525A>G), CTT408CTA (1534T>A), ATT418ATC (1564T>C), TAT419TAC (1567T>C), GTA422GTG (1576A>G), GCA423GCT (1579A>T), CTC425CTT (1585C>T), TCT428TCA (1594T>A), GTA438GTG (1624A>G), GTT446GTA (1648T>A), GTT454GTC (1672T>C), AAA459AAG (1687A>G), GCC460GCT (1690C>T), TTC461TTT (1693C>T), ACC469ACA (1717C>A), GTA473GTG (1729A>G), TGC477TGT (1741C>T), GTG479GTT (1747G>T), AAT489AAC (1777T>C), GTT492GTC (1786T>C), AGT496GGT (1796A>G), GGT501GGC (1813T>C), CAA504CAG (1822A>G), TTT512TTC (1846T>C), AAC515AAT (1855C>T), ATT517ATA (1861T>A), GCT519GCG (1867T>G), ACT520ACC (1870T>C), GTT521ATT (1871G>A), CAA526CAG (1888A>G), CGG527AGA (1889C>A 1891G>A), TCA530GCT (1898T>G 1900A>T), TAC532AAT (1904T>A 1906C>T), AGC534AGT (1912C>T), CTG535TTG (1913C>T), GAT539GAC (1927T>C), GAC540GAT (1930C>T), ACG543ACA (1939G>A), CCT544CCA (1942T>A), GGA546GAA (1947G>A), ATT552GTT (1964A>G), GGT553GGC (1969T>C), GAA562GAG (1996A>G), TAT564TAC (2002T>C), AGC569AGT (2017C>T), GTT578GTC (2044T>C), GCC581GCG (2053C>G), GCG582GCT (2056G>T), GTG584GCA (2061T>C 2062G>A), ATA605ATT (2125A>T), TTC609TTT (2137C>T), GAC614GAT (2152C>T), GAT616GAC (2158T>C), GCG638GCA (2224G>A), CTA646TTG (2246C>T 2248A>G), AAG653AAA (2269G>A), AAG655AGA (2274A>G 2275G>A), AAC662AAT (2296C>T), TTA666TTG (2308A>G), CGA671AGA (2321C>A), CAA672CGC (2325A>G 2326A>C), TCC674TCT (2332C>T), GGT675GAT (2334G>A), ACC699GCC (2405A>G), ATT704CTT (2420A>C), CTC708CTT (2434C>T), CTG710CTA (2440G>A), TAC719TAT (2467C>T), GCA724ACA (2480G>A), TGC725TGT (2485C>T), TCT726TCG (2488T>G), GAC727GAT (2491C>T), AAG728ACA (2493A>C 2494G>A), ATT730ATC (2500T>C), TTA731CTA (2501T>C), GGC739GGT (2527C>T), GTA744GTG (2542A>G), GTT745ATT (2543G>A), GGT748GGC (2554T>C), CAC750CAT (2560C>T), AGT751AGC (2563T>C), TTT752CTG (2564T>C 2566T>G), AAT754AAC (2572T>C), ACG757ACT (2581G>T), ATT758GTT (2582A>G), TAC760TAT (2590C>T), AAT761AGC (2592A>G 2593T>C), AAA769AAG (2617A>G), AAA792AAG (2686A>G), ATC795ATT (2695C>T), CTC805TTT (2723C>T 2725C>T), ATC819ACC (2766T>C), ATT820ATC (2770T>C), GAT823GAC (2779T>C), GAC841GGC (2832A>G), TAC851TAT (2863C>T), AAA872AAG (2926A>G), AAC875AAT (2935C>T), GAC888GAT (2974C>T), GTT890GTC (2980T>C), AAT891ATT (2982A>T), AGA893AAA (2988G>A), GAA896AAA (2996G>A), GAA904GAG (3022A>G), GAG910GAA (3040G>A), ATT920ATC (3070T>C), ACC922ACT (3076C>T), TAT924TAC (3082T>C), AAA925AAG (3085A>G), ATA927ACA (3090T>C), ACC929ACG (3097C>G), GAA932GAT (3106A>T), GAG933GAA (3109G>A), TCC939TCT (3127C>T), AAA941GAA (3131A>G), CTT942CTC (3136T>C), AAA944AGA (3141A>G), GAG951GAA (3163G>A), GGC958GGT (3184C>T), TAT959TAC (3187T>C), AAT971AAC (3223T>C), ATT978ATC (3244T>C), TAC981TAT (3253C>T), GCT987GTT (3270C>T), GAT992AAC (3284G>A 3286T>C), GCA995GCG (3295A>G), AGT996AGC (3298T>C), TTG1002TCG (3315T>C), ATT1012ACC (3345T>C 3346T>C), GAA1014GAG (3352A>G), ACT1017GTT (3359A>G 3360C>T), TCA1018TCT (3364A>T), GAT1020GCT (3369A>C), GAT1021GCT (3372A>C), GCT1022GTT (3375C>T), GAT1024GAC (3382T>C), GTT1025GCT (3384T>C), TCA1026GTG (3386T>G 3387C>T 3388A>G), TCT1027TCA (3391T>A), GTA1028GTT (3394A>T), GAA1031GAG (3403A>G), TCA1034GCA (3410T>G), GTC1036TCT (3416G>T 3417T>C 3418C>T), GAT1037GAC (3421T>C), GAA1039GAG (3427A>G), TTT1041_TCC1065del (3431_3505delTTTGTTGAACAAGTTTCGCTCGTAGAAGAAAATAATGTTTTAACTCCTGCTGTAAACCCTGATGAGCAACTTTCC), TCA1066TCT (3508A>T), AAA1069GAA (3515A>G), GAT1071GTT (3522A>T), GTC1073GTT (3529C>T), CCG1079CCA (3547G>A), GCT1082GTT (3555C>T), CCT1094CAT (3591C>A), TTG1096TTT (3598G>T), ACC1097TCA (3599A>T 3601C>A), CCA1098CCT (3604A>T), TTC1099TTT (3607C>T), AAG1100AGG (3609A>G), ACA1101ACG (3613A>G), AAT1103GAT (3617A>G), ATC1108ATT (3634C>T), ATA1119GTG (3665A>G 3667A>G), AAC1120AAT (3670C>T), TAT1124TAC (3682T>C), TTG1126CTG (3686T>C), GCC1128GCT (3694C>T), TTT1129TTC (3697T>C), AAC1133AAA (3709C>A), GAT1135GAC (3715T>C), TTG1136CTG (3716T>C), GGT1139AAT (3725G>A 3726G>A), AAA1142AAT (3736A>T), GAT1143GGC (3738A>G 3739T>C), GTT1145GTC (3745T>C), CCT1147CCC (3751T>C), GTA1149GTG (3757A>G), GAC1150AAT (3758G>A 3760C>T), CTA1156ATG (3776C>A 3778A>G), ACT1157ACC (3781T>C), TTG1158TTA (3784G>A), AAG1159CAG (3785A>C), GAT1162GCC (3795A>C 3796T>C), TCA1163TCT (3799A>T), GGG1164GGA (3802G>A), GAA1167GAG (3811A>G), CTT1169CTC (3817T>C), GTC1182GTA (3856C>A), ACA1183ATT (3858C>T 3859A>T), AGT1185AAC (3864G>A 3865T>C), GCT1186GCC (3868T>C), GTT1192AAT (3884G>A 3885T>A), TTA1197TTG (3901A>G), GAA1198GAG (3904A>G), CGA1199AGA (3905C>A), ACT1200ACC (3910T>C), AAG1203AAA (3919G>A), ACA1205ACT (3925A>T), CCT1206CCA (3928T>A), AGG1208AAG (3933G>A), AAG1220AAA (3970G>A), ATT1222ACC (3975T>C 3976T>C), AAG1226AGA (3987A>G 3988G>A), GCT1228GCA (3994T>A), AGC1229AGT (3997C>T), GTG1230GTA (4000G>A), GGT1232GGA (4006T>A), GTT1237GTC (4021T>C), AGA1240AGG (4030A>G), ATT1241ATA (4033T>A), CAG1244CAA (4042G>A), CCT1246CCA (4048T>A), TCA1248ACA (4052T>A), ATT1251GTT (4061A>G), ACA1253CCG (4067A>C 4069A>G), ACT1255GTC (4073A>G 4074C>T 4075T>C), ACA1264CCA (4100A>C), AAA1286AAG (4168A>G), AAG1291AGG (4182A>G), ACT1296ACA (4198T>A), AAT1302ACT (4215A>C), AAA1307GAA (4229A>G), TCT1308CCT (4232T>C), ATG1311ACG (4242T>C), GTT1312ATT (4244G>A), GAA1313_GAG1319del (4247_4267delGAACCACCTGTGCCCGTAGAG), GAC1325GAA (4285C>A), CTT1332CTC (4306T>C), ATA1333TTA (4307A>T), CTA1334ACA (4310C>A 4311T>C), CCC1335CCT (4315C>T), TAT1337TAC (4321T>C), AAA1338GCG (4322A>G 4323A>C 4324A>G), GCG1339GTA (4326C>T 4327G>A), GTC1342ATT (4334G>A 4336C>T), TAC1345TAT (4345C>T), GTT1351ATT (4361G>A), ATT1353GTT (4367A>G), TTT1355TTC (4375T>C), GTC1360GTT (4390C>T), CTT1361GTT (4391C>G), CAC1371CAT (4423C>T), GTG1372GTA (4426G>A), GGC1374GGT (4432C>T), AGA1377AAA (4440G>A), GCT1378GCC (4444T>C), GTA1381GCA (4452T>C), GGT1385GGC (4465T>C), AAA1389AGC (4476A>G 4477A>C), AAG1392AGA (4485A>G 4486G>A), GAG1393GAA (4489G>A), TAC1394TAT (4492C>T), AGC1398AAT (4503G>A 4504C>T), AAA1399AAG (4507A>G), GCA1400TCA (4508G>T), AAC1411AAT (4543C>T), TTG1419TTA (4567G>A), GAC1428GAT (4594C>T), CTC1435CTT (4615C>T), ATC1442ATT (4636C>T), GCT1443GCC (4639T>C), GAT1446GAA (4648T>A), AAG1448AAA (4654G>A), CTA1450TTA (4658C>T), ATC1458ATT (4684C>T), CTG1463CTT (4699G>T), GTT1465ACA (4703G>A 4704T>C 4705T>A), TCG1466TCA (4708G>A), TTG1467CTG (4709T>C), CTA1470TTA (4718C>T), CTT1471ATT (4721C>A), GTC1474ATC (4730G>A), ACA1475ACT (4735A>T), AGA1477AGG (4741A>G), TTA1479TTG (4747A>G), TTT1482TTC (4756T>C), CAA1487CAT (4771A>T), GTT1490ACT (4778G>A 4779T>C), AAT1497AAA (4801T>A), ATT1500ATC (4810T>C), CCT1501CCA (4813T>A), ATC1502GTC (4814A>G), AAG1503AAT (4819G>T), GAT1507GAC (4831T>C), GTG1509GTA (4837G>A), CAA1511CAC (4843A>C), AAG1512AAA (4846G>A), GTA1516GTG (4858A>G), GAG1524GAA (4882G>A), CTC1526CTT (4888C>T), GGA1528GGG (4894A>G), GTT1530GTC (4900T>C), GAC1534GAT (4912C>T), AAA1535AAG (4915A>G), GTT1537GTC (4921T>C), ACT1538ACC (4924T>C), CAG1540CAT (4930G>T), CCA1542CCT (4936A>T), AGT1543AAT (4938G>A), TCA1545TCT (4945A>T), GAT1546GAC (4948T>C), GTC1547GTT (4951C>T), GTC1551ATC (4961G>A), GTT1552GTC (4966T>C), GCA1554GCT (4972A>T), TTG1555TTA (4975G>A), GTT1557ATT (4979G>A), GAT1558GAC (4984T>C), AAT1560AGT (4989A>G), GCT1561GCA (4993T>A), TAC1562CAT (4994T>C 4996C>T), GCA1569GCG (5017A>G), GCT1570GTT (5019C>T), TCC1575TCT (5035C>T), GAA1580CAA (5048G>C), GTT1601ATT (5111G>A), GCA1626GCC (5188A>C), ACG1629ATG (5196C>T), GTA1636GTC (5218A>C), TCG1643TCA (5239G>A), GGC1644AGC (5240G>A), ACG1646AAG (5247C>A), GGC1651GGT (5263C>T), GCC1653GCT (5269C>T), GTT1661GGT (5292T>G), GAT1662GAG (5296T>G), GAT1667AAT (5309G>A), GTT1670GTC (5320T>C), CAC1674CAT (5332C>T), GCT1682GCA (5356T>A), ACA1688ACT (5374A>T), GGT1689GGA (5377T>A), GTA1692GTG (5386A>G), TTG1697ATG (5399T>A), GTT1698ATC (5402G>A 5404T>C), GGC1700GGA (5410C>A), ATT1704ACT (5421T>C), CAT1710AGT (5438C>A 5439A>G), AGC1717AGT (5461C>T), ATT1718GTT (5462A>G), ACT1721ACC (5473T>C), GCT1723GTT (5478C>T), ATC1724ATT (5482C>T), TTA1727TTG (5491A>G), GGT1733GGA (5509T>A), GAC1734GAT (5512C>T), TGC1743TGT (5539C>T), TAC1744TAT (5542C>T), GGT1746GGG (5548T>G), TCG1749TCA (5557G>A), TAT1753TAC (5569T>C), GAT1757GAC (5581T>C), GGT1761AGT (5591G>A), GCC1766GCT (5608C>T), GAT1767GAG (5611T>G), TTC1772TTT (5626C>T), GTC1779GTT (5647C>T), ATT1783ATC (5659T>C), AAT1786AAC (5668T>C), GCT1789GTT (5676C>T), AAC1790AAA (5680C>A), ACG1791ACA (5683G>A), AAG1794ATA (5691A>T 5692G>A), ATT1796AAT (5697T>A), ATG1797TCG (5699A>T 5700T>C), ACT1800AAT (5709C>A), GCT1802GTT (5715C>T), AAA1803AAG (5719A>G), TCA1805CCA (5723T>C), AAA1806AGC (5727A>G 5728A>C), GCT1807_AAT1811del (5729_5743delGCTAAAGAATCAAAT), ACG1812AAG (5745C>A), GCT1813ACC (5747G>A 5749T>C), GAA1821GAG (5773A>G), AAT1822ACT (5775A>C), GTT1827GTG (5791T>G), CGT1828TGT (5792C>T), AAA1829GAG (5795A>G 5797A>G), GAA1830CCT (5798G>C 5799A>C 5800A>T), GCT1834GCA (5812T>A), GAT1840GAC (5830T>C), ACA1844TCA (5840A>T), CTC1846TTC (5846C>T), GTA1852ATG (5864G>A 5866A>G), GCT1856ACT (5876G>A), GAT1858GAC (5884T>C), ATT1860GTA (5888A>G 5890T>A), CTC1864CTA (5902C>A), TAT1870TAC (5920T>C), TTA1871CTG (5921T>C 5923A>G), GTT1873GTC (5929T>C), TCT1881TCA (5953T>A), GTT1886TTT (5966G>T), GTA1888GTC (5974A>C), CCA1891CCG (5983A>G), GTA1893GCA (5988T>C), AGA1895AAA (5994G>A), AAC1896GAC (5996A>G), TTG1897TTA (6001G>A), GTT1901ATT (6011G>A), AGA1902AGG (6016A>G), TAT1906TAC (6028T>C), AGA1908CGA (6032A>C), CCA1913CCT (6049A>T), CTG1915CTA (6055G>A), TAC1918TAT (6064C>T), ATA1919GCA (6065A>G 6066T>C), CTA1923TTA (6077C>T), TTT1931TTC (6103T>C), TTC1932TTT (6106C>T), AAA1943AGA (6138A>G), TTG1944TTA (6142G>A), AGT1954GGT (6170A>G), AAG1960AAA (6190G>A), TCG1961TCA (6193G>A), AAT1966AAC (6208T>C), TTG1969CTG (6215T>C), TGC1970TGT (6220C>T), GAT1984GAC (6262T>C), CAG1987CAA (6271G>A), TCA1989GCG (6275T>G 6277A>G), TAC1992TAT (6286C>T), CCA1996CCC (6298A>C), ATA2002GTA (6314A>G), TCG2005TCC (6325G>C), ATA2008ATG (6334A>G), TTC2009TTT (6337C>T), AAC2015AAT (6355C>T), CTT2021GTT (6371C>G), TAT2024TAC (6382T>C), GTC2026ATT (6386G>A 6388C>T), TCC2027TCT (6391C>T), CTT2030CTC (6400T>C), TTA2034CTG (6410T>C 6412A>G), TAT2036TAC (6418T>C), AGC2043AGT (6439C>T), TCA2053TCT (6469A>T), TCT2055TCC (6475T>C), GTG2063ATA (6497G>A 6499G>A), CTA2076TTT (6536C>T 6538A>T), AAC2079AAT (6547C>T), AAC2080AAT (6550C>T), CCG2081CCT (6553G>T), AAG2084AAA (6562G>A), ACA2085ACT (6565A>T), TGT2086TGC (6568T>C), ACG2093ACA (6589G>A), CGC2094CGT (6592C>T), CCT2096CCC (6598T>C), ATG2105CTG (6623A>C), GTG2108GTT (6634G>T), GTC2110GTT (6640C>T), TGC2119TGT (6667C>T), AAC2123AAT (6679C>T), GAC2130GAT (6700C>T), GAT2135GAC (6715T>C), GAT2141GAC (6733T>C), CTA2147GTA (6749C>G), ATT2151GTT (6761A>G), GAT2159GAC (6787T>C), AGG2160AGA (6790G>A), TCA2161TCG (6793A>G), TAC2162TAT (6796C>T), GTC2165GTT (6805C>T), TGT2170TGC (6820T>C), ACC2171TCT (6821A>T 6823C>T), GAC2172GAT (6826C>T), GGG2173GGA (6829G>A), TAT2175TAC (6835T>C), TTC2177TTT (6841C>T), GAA2181GAC (6853A>C), TAT2186TAC (6868T>C), CAT2192AAC (6884C>A 6886T>C), TAT2195TAC (6895T>C), AGT2197GGT (6899A>G), CAG2198CAA (6904G>A), GAG2199GAA (6907G>A), ACA2203ACT (6919A>T), TTC2205TTT (6925C>T), CTG2206TTG (6926C>T), GAT2208GAC (6934T>C), GTT2212GTC (6946T>C), TAC2213TAT (6949C>T), AAC2214AAT (6952C>T), GGG2217GGT (6961G>T), AGT2222AGC (6976T>C), GTT2223GTC (6979T>C), AAC2225AAT (6985C>T), GTC2226GTA (6988C>A), TAC2229TAT (6997C>T), ATC2240ATT (7030C>T), GCC2260GCT (7090C>T), AAC2267AAT (7111C>T), CTC2288CTT (7174C>T), ACT2294ACC (7192T>C), ATT2299GTT (7205A>G), AAT2300ACT (7209A>C), CGA2312CGG (7246A>G), ATT2322ATC (7276T>C), CCT2324CCC (7282T>C), GAT2333GAC (7309T>C), CTC2360CTA (7390C>A), AGT2361AGC (7393T>C), CAG2362CAA (7396G>A), TTC2364TTT (7402C>T), TCC2365TCT (7405C>T), ACT2366GCA (7406A>G 7408T>A), GTG2380GTA (7450G>A), AAT2385AAC (7465T>C), GTT2393GTG (7489T>G), CTG2399TTG (7505C>T), CCG2400CCA (7510G>A), CGG2403CGA (7519G>A), TCT2407TCA (7531T>A), TCG2409TCT (7537G>T), GGT2415GGC (7555T>C), CTC2426ATC (7586C>A), TTC2427TCT (7590T>C 7591C>T), CTT2430TTG (7598C>T 7600T>G), GTT2431GTC (7603T>C), TTG2432TTT (7606G>T), ACC2435ATT (7614C>T 7615C>T), CTT2436GTG (7616C>G 7618T>G), GGT2438GGA (7624T>A), TTA2439CTA (7625T>C), GTT2445CTT (7643G>C), TAT2450TAC (7660T>C), TCA2469CCA (7715T>C), AAC2475AAT (7735C>T), CAT2478CAC (7744T>C), AAT2479AAC (7747T>C), TTT2488TTC (7774T>C), CAT2492TAT (7784C>T), AGA2516AGG (7858A>G), CCT2519CCC (7867T>C), CCT2522CCA (7876T>A), GCG2523GCA (7879G>A), GGC2541GGT (7933C>T), ACT2543ACC (7939T>C), ACT2550ACA (7960T>A), AAT2557AAC (7981T>C), TGT2563TGC (7999T>C), AAT2566AGT (8007A>G), GCG2568GCA (8014G>A), ACT2570ACC (8020T>C), ACT2573TCT (8027A>T), GGC2574GGT (8032C>T), ATT2575CTT (8033A>C), GTC2579GTT (8047C>T), CTG2598ATG (8102C>A), CAT2605CAC (8125T>C), GTA2611GTT (8143A>T), GCC2615TCC (8153G>T), ATT2616ATC (8158T>C), AGT2619GGT (8165A>G), TTT2620CTT (8168T>C), CTA2622TTA (8174C>T), ACT2639ATT (8226C>T), GAA2640GAC (8230A>C), TTC2647TTT (8251C>T), GTC2654GTT (8272C>T), GAT2656GAC (8278T>C), GGA2660GGC (8290A>C), GGT2662GGG (8296T>G), TCC2668TCT (8314C>T), ACA2669GCA (8315A>G), TTG2670ATG (8318T>A), TTC2672TTT (8326C>T), GTG2676GTT (8338G>T), AAT2681AAC (8353T>C), AAT2683AAC (8359T>C), TTG2694ATG (8390T>A), GTT2698ATC (8402G>A 8404T>C), TGC2701TGT (8413C>T), TTA2702TTG (8416A>G), GCA2705GCG (8425A>G), CTC2722CTT (8476C>T), GTA2724GTT (8482A>T), TTG2731CTT (8501T>C 8503G>T), TCA2737TCT (8521A>T), AAC2743AAT (8539C>T), GTT2749ATC (8555G>A 8557T>C), ATC2752ATT (8566C>T), TAT2755TAC (8575T>C), TTC2756TTT (8578C>T), AGA2759CGG (8585A>C 8587A>G), CTT2761CTC (8593T>C), CCA2764CCT (8602A>T), GGT2765GGC (8605T>C), GTT2766ATT (8606G>A), TTA2767CTA (8609T>C), GCG2769GCA (8617G>A), GGG2770GGA (8620G>A), TTC2771TTT (8623C>T), ATC2773ATT (8629C>T), TTG2776GTG (8636T>G), GCC2779GCT (8647C>T), GTT2783GTG (8659T>G), GTT2785GTG (8665T>G), TAT2787TAC (8671T>C), ATA2788GTA (8672A>G), GTG2790ATG (8678G>A), CTT2792TTC (8684C>T 8686T>C), TAT2793TAC (8689T>C), GAT2794GAC (8692T>C), AAA2803AAG (8719A>G), GTA2804GTT (8722A>T), ACA2806ACG (8728A>G), GAA2810GAG (8740A>G), TTC2818TTT (8764C>T), GAA2834GAG (8812A>G), AAC2850GCA (8858A>G 8859A>C 8860C>A), AGC2851AGT (8863C>T), TAT2855TAC (8875T>C), ACT2859ACC (8887T>C), TCG2861TCA (8893G>A), GAG2864GAA (8902G>A), TGC2871TGT (8923C>T), TAC2872TAT (8926C>T), GCG2878GCA (8944G>A), TCT2883TCC (8959T>C), GTT2884GTC (8962T>C), GAT2888GAC (8974T>C), TAT2891TAC (8983T>C), CTG2902CTA (9016G>A), CAG2903CAA (9019G>A), GGA2905GGG (9025A>G), AGA2907CGA (9029A>C), AGT2913AGC (9049T>C), GTT2915ATT (9053G>A), GTG2916ATT (9056G>A 9058G>T), CCC2918CCT (9064C>T), GTG2923GTA (9079G>A), TAT2925TAC (9085T>C), GGC2926GGT (9088C>T), GTC2939GTT (9127C>T), CAC2944CAT (9142C>T), TAT2956TAC (9178T>C), TTT2968TTC (9214T>C), GCG2975GTG (9234C>T), AAA2983AAG (9259A>G), AAG2985AAA (9265G>A), GTA2987GTG (9271A>G), CTT2991CTC (9283T>C), GTG2993GTA (9289G>A), GTA2996GTT (9298A>T), AAC2997AAT (9301C>T), CCT2998CCC (9304T>C), CCA3001CCG (9313A>G), AAA3006AAG (9328A>G), TCC3007TCT (9331C>T), CCC3024CCT (9382C>T), GTC3027GTA (9391C>A), GTT3030GTG (9400T>G), AGA3033CGG (9407A>C 9409A>G), AGT3034AGC (9412T>C), ATC3038ATT (9424C>T), GGT3040GGC (9430T>C), TTT3042TTC (9436T>C), ACC3046ACT (9448C>T), GTA3053GTG (9469A>G), TTA3054CTA (9470T>C), TTC3061TTT (9493C>T), GGT3072GGC (9526T>C), GAA3080GTA (9549A>T), CAG3090CAA (9580G>A), ATT3115ATC (9655T>C), AAT3116AAC (9658T>C), AAC3124AAT (9682C>T), ACA3125TCA (9683A>T), ACG3128TCG (9692A>T), AAT3139AAC (9727T>C), GAT3148GAC (9754T>C), AAT3151AAC (9763T>C), GCT3154GCC (9772T>C), TCT3185TCC (9865T>C), CTG3186TTG (9866C>T), GAC3188GAT (9874C>T), AGT3206GGT (9926A>G), ATA3212CTA (9944A>C), ATG3216GTG (9956A>G), TTC3226TTT (9988C>T), TTC3230TTT (10000C>T), GTT3247ATT (10049G>A), GTA3254GTG (10072A>G), TTG3257TTA (10081G>A), AAA3263AAG (10099A>G), GTT3277GTC (10141T>C), ATT3278GTT (10142A>G), CAT3283CAC (10159T>C), GAT3288GAC (10174T>C), GTG3297TTC (10199G>T 10201G>C), AAC3301AAT (10213C>T), ACC3304ACA (10222C>A), GTC3309GTT (10237C>T), CAG3312CAA (10246G>A), CTG3318CTT (10264G>T), ATA3326ACA (10287T>C), TGC3327TAC (10290G>A), TTT3331TTC (10303T>C), CTG3341CTA (10333G>A), ATT3346GTT (10346A>G), GTC3353GTT (10369C>T), TTT3368ATT (10412T>A), TTG3370TTA (10420G>A), AAG3385AAA (10465G>A), GCA3392ATA (10484G>A 10485C>T), TAC3394TAT (10492C>T), GTT3396TTT (10496G>T), GGC3414GGT (10552C>T), GTA3419ATA (10565G>A), TAT3428TAC (10594T>C), CTA3429CTG (10597A>G), TGT3432TGC (10606T>C), GGT3435GGC (10615T>C), GCC3458GCT (10684C>T), ACT3473ACG (10729T>G), GGA3490GAA (10779G>A), TCT3500TCC (10810T>C), ACA3508ACG (10834A>G), CTC3513CTT (10849C>T), GGT3514GGC (10852T>C), GAC3545GAT (10945C>T), GCC3546GTT (10947C>T 10948C>T), CTC3548CTT (10954C>T), AAC3577AAT (11041C>T), ACC3578ACT (11044C>T), GTA3584GTG (11062A>G), GCT3589GCA (11077T>A), GCT3590GCC (11080T>C), GCC3602GCA (11116C>A), AAG3622AAA (11176G>A), GCT3623GCA (11179T>A), ATC3626ATT (11188C>T), AGC3629AGT (11197C>T), GAA3630GAG (11200A>G), GAA3634GAG (11212A>G), TCC3636TCA (11218C>A), AAA3654AAG (11272A>G), GCC3658ACC (11282G>A), CTC3673CTT (11329C>T), CTC3677CTT (11341C>T), ACC3687ACT (11371C>T), AGC3700AGT (11410C>T), AGG3724AGA (11482G>A), GAG3740GCA (11529A>C 11530G>A), GTC3749GTT (11557C>T), AAA3752AAG (11566A>G), ATA3768TTA (11612A>T), GAA3780GAG (11650A>G), AAA3789AAG (11677A>G), GGC3799GGT (11707C>T), GCT3810GCC (11740T>C), GGT3813TGT (11747G>T), GTA3852GTT (11866A>T), GAT3853GAA (11869T>A), GTT3860GTC (11890T>C), TAT3862TAC (11896T>C), ACG3884ACA (11962G>A), CTG3887TTG (11969C>T), GGT3900AGT (12008G>A), ACA3903ACG (12019A>G), TTG3904TTA (12022G>A), GAC3917GAT (12061C>T), ACC3927ACT (12091C>T), TGT3929TGC (12097T>C), GCT3942GCC (12136T>C), AAT3945AAC (12145T>C), GGC3946GGT (12148C>T), TCT3949GCT (12155T>G), CAG3953CAA (12169G>A), GAC3954GAT (12172C>T), GGC3958GGT (12184C>T), GCA3959GCT (12187A>T), TCT3960TCA (12190T>A), GTA3961GTT (12193A>T), ATT3963ATC (12199T>C), TAT3964TAC (12202T>C), TGT3965TGC (12205T>C), TGT3967TGC (12211T>C), GTA3969GTT (12217A>T), CAT3971CAC (12223T>C), GCA3973GCT (12229A>T), TTG3977CTA (12239T>C 12241G>A), TTT3980TAT (12249T>A), GGT3982GGC (12256T>C), AAA3983AAG (12259A>G), GTC3985GTG (12265C>G), GTA3987ATA (12269G>A), ACC3989ACT (12277C>T), GGG3990GGC (12280G>C), ACT3991ACC (12283T>C), CAG3992CAA (12286G>A), CCT3994CCA (12292T>A), AGA3996CGT (12296A>C 12298A>T), TGC4004TGT (12322C>T), GTC4005GTT (12325C>T), GTT4006GTC (12328T>C), TGC4007TGT (12331C>T), GGT4008GGC (12334T>C), TGC4009TGT (12337C>T), ACT4012AAC (12345C>A 12346T>C), TGT4015TGC (12355T>C), TGT4017TGC (12361T>C), ATA4022ATG (12376A>G), CAA4023CAG (12379A>G), GGC4024AGT (12380G>A 12382C>T), ACC4025TCT (12383A>T 12385C>T), ATT4027GTT (12389A>G), TAC4061TAT (12492C>T), AAT4062AAC (12495T>C), GCA4066GCG (12507A>G), ACC4074ACA (12531C>A), TCC4077TCA (12540C>A), CGT4078AGA (12541C>A 12543T>A), TTA4082TTG (12555A>G), GTA4090ATT (12577G>A 12579A>T), AAG4092AAA (12585G>A), ACT4095ACA (12594T>A), AGC4097ACC (12599G>C), TCA4112TCT (12645A>T), GTA4114GCT (12650T>C 12651A>T), GAA4117GAG (12660A>G), TTG4122AAC (12673T>A 12674T>A 12675G>C), TAT4123TAC (12678T>C), GAA4125GAG (12684A>G), CGA4127AGA (12688C>A), GAA4129GAG (12696A>G), AAG4136AGG (12716A>G), GAT4137AAT (12718G>A), CTG4146CTT (12747G>T), AGG4151AGA (12762G>A), AAC4152AAT (12765C>T), CTT4161CTC (12792T>C), CTT4165CTC (12804T>C), TTA4168GTA (12811T>G), GCC4170GCT (12819C>T), AAT4172ACT (12824A>C), TCT4174GAA (12829T>G 12830C>A 12831T>A), AAT4178AAC (12843T>C), AAG4179AAA (12846G>A), GTA4185GTT (12864A>T), GCT4189GCC (12876T>C), CAT4191CAC (12882T>C), GTA4193GTT (12888A>T), TAC4194TAT (12891C>T), AGA4196AAA (12896G>A), CCT4199CCC (12906T>C), ATA4200ATT (12909A>T), AAC4203AAT (12918C>T), GTA4209GTT (12936A>T), GCG4210GCT (12939G>T), TGT4212TGC (12945T>C), GCT4214GCA (12951T>A), ATT4215ATA (12954T>A), GGT4219GGC (12966T>C), TAC4220TAT (12969C>T), ACT4225ACA (12984T>A), GAT4227GAC (12990T>C), AAC4228AAT (12993C>T), TTT4235TTC (13014T>C), GGT4239GGA (13026T>A), TTT4241TTC (13032T>C), GTA4242GTG (13035A>G), ACA4244ACT (13041A>T), ACG4245GCT (13042A>G 13044G>T), GGA4249GGT (13056A>T), TGT4250TGC (13059T>C), TGC4252TGT (13065C>T), CCC4262CCT (13095C>T), TGT4269TGC (13116T>C), AAT4274AAC (13131T>C), GCT4283TCT (13156G>T), TAC4288TAT (13173C>T), TTC4295TTT (13194C>T), ACG4296ACT (13197G>T), GAC4297GAA (13200C>A), CAC4298CAT (13203C>T), GAA4300GAG (13209A>G), AAA4301TAC (13210A>T 13212A>C), CAT4304CAA (13221T>A), TAT4306TAC (13227T>C), CAC4309TAC (13234C>T), GAT4311GAG (13242T>G), CGA4312CGC (13245A>C), TAC4314TAT (13251C>T), CAC4315CAT (13254C>T), CCT4316CCA (13257T>A), TGC4318TGT (13263C>T), ACA4322ACT (13275A>T), GAT4324GAC (13281T>C), TGC4326TGT (13287C>T), ACG4335ACA (13314G>A), TCA4338TCT (13323A>T), ACC4340ACA (13329C>A), CCT4342CCA (13335T>A), AGT4343ATG (13337G>T 13338T>G), ACC4344ACA (13341C>A), CTT4400CTC (13509T>C), TAC4440TAT (13629C>T), GGC4465GGT (13704C>T), GAG4467GAA (13710G>A), TAT4475TAC (13734T>C), TAC4476TAT (13737C>T), AAA4494AAG (13791A>G), TTT4500TTC (13809T>C), TAC4503TAT (13818C>T), GAC4504GAT (13821C>T), GAC4519GAT (13866C>T), GGT4523GGC (13878T>C), AGA4573CGA (14026A>C), GTA4577GTG (14040A>G), GAC4619GAT (14166C>T), CTT4622CTC (14175T>C), TTG4625TTA (14184G>A), AAC4631AAT (14202C>T), GGG4636GGA (14217G>A), CGT4644CGC (14241T>C), GCT4653GCC (14268T>C), AAC4677AAT (14340C>T), GGC4691GGT (14382C>T), GGT4699GGC (14406T>C), AAC4711AAT (14442C>T), TCT4712TCA (14445T>A), GGC4729GGA (14496C>A), GTT4738GTC (14523T>C), AAG4741AAA (14532G>A), TAT4795TAC (14694T>C), AAT4811AAC (14742T>C), AGC4826AGT (14787C>T), TGT4833TGC (14808T>C), CAA4835CAG (14814A>G), GTA4841GTT (14832A>T), TAC4851TAT (14862C>T), GAC4853GAT (14868C>T), TCT4855TCC (14874T>C), GTT4864GTC (14901T>C), GTA4880GTG (14949A>G), TAC4902TAT (15015C>T), GGC4918GGT (15063C>T), AAA4947AAG (15150A>G), GGT4955GGC (15174T>C), ACG4979ACT (15246G>T), TAT4983TAC (15258T>C), CAC4991CAT (15282C>T), AAG4992AAA (15285G>A), CAG5030CAA (15399G>A), TTG5031CTG (15400T>C), AAC5040AAT (15429C>T), TTG5044TTA (15441G>A), GGT5051GGC (15462T>C), GAG5053GAA (15468G>A), GAC5071GAT (15522C>T), GCT5121GCC (15672T>C), ACT5135ACG (15714T>G), TCC5161TCT (15792C>T), ACG5167ACT (15810G>T), CTT5172TTG (15823C>T 15825T>G), AAC5210AAT (15939C>T), AAA5229AAG (15996A>G), AAG5241AAA (16032G>A), TTG5250CTG (16057T>C), GAC5268GAT (16113C>T), CTA5270TTA (16117C>T), TTC5278TTT (16143C>T), ACA5297ACG (16200A>G), ACT5304ACC (16221T>C), CTA5316TTA (16255C>T), GTC5326GTT (16287C>T), TAT5346TAC (16347T>C), GGC5353GGA (16368C>A), CCA5355CCG (16374A>G), CAA5356CAG (16377A>G), CCT5359CCA (16386T>A), CTG5364TTG (16399C>T), GTG5382ATG (16453G>A), TTC5390TTT (16479C>T), CAT5392CAC (16485T>C), GTT5409GTG (16536T>G), AAC5412AAT (16545C>T), TCC5437TCT (16620C>T), GCG5451GCA (16662G>A), GCA5454TCA (16669G>T), CAC5455CAT (16674C>T), AAA5461AAG (16692A>G), GCT5462GCC (16695T>C), AGC5470AGT (16719C>T), ACG5483ACA (16758G>A), CAG5484CAA (16761G>A), GAC5487GAT (16770C>T), GTT5497GTC (16800T>C), ATC5498ATT (16803C>T), TCC5503TCT (16818C>T), TTC5514TTT (16851C>T), AGA5532CGA (16903A>C), GAC5545GAT (16944C>T), CAG5551CAA (16962G>A), TTG5559TTA (16986G>A), TCA5564TCG (17001A>G), AGC5566AGT (17007C>T), AGT5580AGC (17049T>C), TTG5581TTA (17052G>A), TCC5582TCT (17055C>T), AAT5584AAC (17061T>C), TTA5591CTA (17080T>C), AAG5598AAA (17103G>A), TAC5620TAT (17169C>T), ACT5626ACG (17187T>G), GAC5628GAT (17193C>T), GGT5639GGC (17226T>C), GAC5641GAT (17232C>T), CCT5657CCC (17280T>C), GAT5667GAC (17310T>C), TGC5675TGT (17334C>T), ATT5701ATC (17412T>C), GAT5730GAC (17499T>C), ATT5733ATC (17508T>C), CCA5755CCT (17574A>T), GGT5761GGC (17592T>C), GTC5773GTT (17628C>T), TGT5791TGC (17682T>C), GAC5793GAT (17688C>T), ACG5800ACA (17709G>A), AGC5804AGT (17721C>T), ATG5805ATT (17724G>T), TGT5811TGC (17742T>C), GAC5841GAT (17832C>T), AAC5851AAT (17862C>T), GTT5862GTG (17895T>G), TTG5871CTG (17920T>C), CAT5880CAC (17949T>C), CCC5885CCT (17964C>T), GGC5887GGA (17970C>A), CCA5894CCT (17991A>T), TTT5898TTC (18003T>C), GAT5901GAC (18012T>C), CGT5902CGA (18015T>A), GAC5915GAT (18054C>T), TAT5916TAC (18057T>C), CTT5925TTA (18082C>T 18084T>A), TTA5927TTG (18090A>G), TGC5931TGT (18102C>T), TTT5939TTC (18126T>C), AGA5944AGG (18141A>G), CGC5950CGA (18159C>A), CTG5953TTG (18166C>T), GTA5965GTC (18204A>C), AAA6009AAG (18336A>G), AAG6016AAA (18357G>A), CTT6030CTC (18399T>C), TAT6038TAC (18423T>C), AAC6039AAT (18426C>T), GGC6045GGT (18444C>T), ACG6047ACA (18450G>A), GAC6055GAT (18474C>T), TAC6057TAT (18480C>T), CTT6059CTG (18486T>G), AAC6078AAT (18543C>T), ACT6086GCC (18565A>G 18567T>C), GAC6099GAT (18606C>T), GGA6106GGG (18627A>G), AAT6115AAC (18654T>C), TTC6125TTT (18684C>T), CTA6127TTA (18688C>T), AAA6130AAG (18699A>G), CGC6131CGT (18702C>T), TAC6151TAT (18762C>T), AAA6152AAG (18765A>G), GAC6157GAT (18780C>T), GAA6161GAG (18792A>G), TGC6162TGT (18795C>T), CCC6163CCT (18798C>T), GTA6182TCA (18853G>T 18854T>C), GAA6194GAG (18891A>G), CGC6195CGT (18894C>T), AAC6208AGC (18932A>G), AAC6245AAT (19044C>T), GAG6247GAT (19050G>T), CAT6258CAG (19083T>G), GGC6288GGT (19173C>T), GTC6302GTT (19215C>T), TCC6303TCT (19218C>T), TCG6315TCA (19254G>A), ACT6332AAT (19304C>A), GAC6359GAT (19386C>T), AAC6414AAT (19551C>T), AGA6443AAA (19637G>A), GTT6452GTC (19665T>C), CTG6476TTG (19735C>T), GTG6492GTA (19785G>A), AAC6506AAT (19827C>T), GGT6542GGC (19935T>C), AAA6545AAG (19944A>G), GAC6548GAT (19953C>T), AAC6551AAT (19962C>T), ACT6559ACC (19986T>C), GCT6575GTT (20033C>T), ACG6607ACC (20130G>C), TCA6608TCG (20133A>G), GAT6630GAC (20199T>C), CAT6651CAC (20262T>C), GAC6656GAT (20277C>T), TTT6660TTC (20289T>C), AAT6666AAC (20307T>C), GTC6681GTT (20352C>T), TTA6690TTG (20379A>G)
11453100%983995.9%1453 (99.9%)1387 (95.3%)2/0/0/01
Protein mutations:L8I (20457C>A 20459C>T), L18S (20488T>C), T21S (20496A>T), E24D (20507A>T), I26R (20512T>G), S46Q (20571A>C 20572G>A 20573T>A), N47S (20575A>G 20576C>T), S53I (20593G>T), R73T (20652C>A 20653G>C 20654A>T), F77Y (20665T>A), Q78E (20667C>G), V89D (20701T>A), V116I (20781G>A 20783T>C), I118_S119insYI (20789_20790insTATATA), R122G (20799A>G), K132E (20829A>G), V136L (20841G>T), H143N (20862C>A), N145D (20868A>G), E147N (20874G>A 20876A>C), Q148T (20877C>A 20878A>C 20879A>C), N155D (20898A>G), T157I (20905C>T), A161N (20916G>A 20917C>A), T172R (20950C>G), D186E (20993C>A), H198N (21027C>A 21029C>T), L199W (21031T>G), T203N (21043C>A), E222H (21099G>C 21101A>C), Y223H (21102T>C), A228V (21118C>T), L251F (21188A>T), H257Y (21204C>T), S270V (21243T>G 21244C>T 21245A>G), I305V (21348A>G), N332S (21430A>G), S378N (21568G>A), S386F (21592C>T), G447D (21775G>A), V457D (21805T>A), N483K (21884T>G), F517L (21984T>C 21986C>T), S527I (22015G>T), T530A (22023A>G), Y531H (22026T>C 22028C>T), V534I (22035G>A), L544R (22066T>G), T584I (22186C>T), D597E (22226C>A), E603D (22244G>T), D691E (22508T>G), R705Q (22549G>A), T768K (22738C>A), S786N (22792G>A), V804I (22845G>A), N837T (22945A>C), S938N (23248G>A), G961R (23316G>C), A1014D (23476C>A), Q1094K (23715C>A), S1237P (24144T>C), V1279A (24271T>C), F1333L (24434T>G), V1405I (24648G>A), F1416C (24682T>G), I1434M (24737A>G)
Codon mutations:CTC8ATT (20457C>A 20459C>T), TTG9TTA (20462G>A), TGT12TGC (20471T>C), ACA16ACT (20483A>T), TTG18TCG (20488T>C), ACA20ACG (20495A>G), ACA21TCA (20496A>T), AAT22AAC (20501T>C), GAA24GAT (20507A>T), TGC25TGT (20510C>T), ATA26AGA (20512T>G), TTG33TTA (20534G>A), ATC40ATT (20555C>T), GAT42GAC (20561T>C), CTG44TTG (20565C>T), AGT46CAA (20571A>C 20572G>A 20573T>A), AAC47AGT (20575A>G 20576C>T), AGT53ATT (20593G>T), GCT72GCA (20651T>A), CGA73ACT (20652C>A 20653G>C 20654A>T), ACT74ACC (20657T>C), TTT77TAT (20665T>A), CAG78GAG (20667C>G), GTT89GAT (20701T>A), GCC92GCT (20711C>T), AAT99AAC (20732T>C), CCA104CCT (20747A>T), TTA105CTA (20748T>C), GTG109GTT (20762G>T), GAG112GAA (20771G>A), GTT116ATC (20781G>A 20783T>C), ATT117ATC (20786T>C), ATA118_TCG119insTATATA (20789_20790insTATATA), TCG119TCA (20792G>A), AGG122GGG (20799A>G), CCC129CCA (20822C>A), AAA132GAA (20829A>G), GTG136TTG (20841G>T), ATA138ATT (20849A>T), CAT143AAT (20862C>A), AAC145GAC (20868A>G), GAA147AAC (20874G>A 20876A>C), CAA148ACC (20877C>A 20878A>C 20879A>C), TCC151AGC (20886T>A 20887C>G), AAT155GAT (20898A>G), ACA157ATA (20905C>T), GCT161AAT (20916G>A 20917C>A), ACG172AGG (20950C>G), GAC173GAT (20954C>T), GGT180GGG (20975T>G), GAC186GAA (20993C>A), GCT190GCG (21005T>G), CAC198AAT (21027C>A 21029C>T), TTG199TGG (21031T>G), ACT203AAT (21043C>A), AAT204AAC (21047T>C), AGC217AGT (21086C>T), GCT219GCC (21092T>C), ACC220ACA (21095C>A), GAA222CAC (21099G>C 21101A>C), TAC223CAC (21102T>C), GCT228GTT (21118C>T), CTA246TTA (21171C>T), TTA251TTT (21188A>T), GAA253GAG (21194A>G), CAT257TAT (21204C>T), TAT261TAC (21218T>C), GCT262GCC (21221T>C), ACC263ACT (21224C>T), GTA265GTC (21230A>C), CCG268CCA (21239G>A), ACA269ACT (21242A>T), TCA270GTG (21243T>G 21244C>T 21245A>G), GGT271GGA (21248T>A), TTC284TTT (21287C>T), AGT289AGC (21302T>C), AGG296AGA (21323G>A), AAT300AAC (21335T>C), TTA303CTA (21342T>C), TTG304TTA (21347G>A), ATT305GTT (21348A>G), AAT306AAC (21353T>C), TTG308TTA (21359G>A), GCA326GCG (21413A>G), AGC329AGT (21422C>T), CAA330CAG (21425A>G), AAT332AGT (21430A>G), GTG334GTA (21437G>A), GTG340GTA (21455G>A), AAC346AAT (21473C>T), ACT350ACC (21485T>C), GGT356GGC (21503T>C), GTA361GTG (21518A>G), TCA363TCG (21524A>G), CTG364TTG (21525C>T), ACA367ACG (21536A>G), AGT378AAT (21568G>A), TCT386TTT (21592C>T), ATC392ATT (21611C>T), GAC398GAT (21629C>T), CGA401CGG (21638A>G), AAA413AAG (21674A>G), CCC420CCT (21695C>T), GGT447GAT (21775G>A), AAT452AAC (21791T>C), GTT457GAT (21805T>A), TAT469TAC (21842T>C), GAA471GAG (21848A>G), GCT480GCC (21875T>C), AAT483AAG (21884T>G), AAA495AAG (21920A>G), GAA514GAG (21977A>G), GTA515GTT (21980A>T), TTC517CTT (21984T>C 21986C>T), GTT518GTG (21989T>G), AGC527ATC (22015G>T), ACA530GCA (22023A>G), TAC531CAT (22026T>C 22028C>T), GTC534ATC (22035G>A), CTT544CGT (22066T>G), AGT545AGC (22070T>C), GCC552GCA (22091C>A), TCG553TCA (22094G>A), CTA555TTA (22098C>T), ATC558ATT (22109C>T), AAC565AAT (22130C>T), AAT566AAC (22133T>C), ACT567ACA (22136T>A), CAA576CAG (22163A>G), TTC577TTT (22166C>T), TCC583TCT (22184C>T), ACT584ATT (22186C>T), TGC585TGT (22190C>T), AAA586AAG (22193A>G), GAC597GAA (22226C>A), GAG603GAT (22244G>T), GCT604GCC (22247T>C), AAA609AAG (22262A>G), TTG624TTA (22307G>A), GGT637GGC (22346T>C), AAT639AAC (22352T>C), GCT645GCC (22370T>C), CAG653CAA (22394G>A), GTG669GTT (22442G>T), GAT691GAG (22508T>G), TAC692TAT (22511C>T), CGA705CAA (22549G>A), AGT712AGC (22571T>C), ATT734ATC (22637T>C), ACG738ACA (22649G>A), AGC743AGT (22664C>T), ACA768AAA (22738C>A), CAT769CAC (22742T>C), ACG772ACA (22751G>A), TAC784TAT (22787C>T), AGT786AAT (22792G>A), GTC804ATC (22845G>A), AAT809AAC (22862T>C), GAC827GAT (22916C>T), AAT837ACT (22945A>C), AAT843AAC (22964T>C), ACT845ACC (22970T>C), GTT850GTC (22985T>C), ACT857ACC (23006T>C), TGT869TGC (23042T>C), GTG883GTT (23084G>T), GAA890GAG (23105A>G), TTT909TTC (23162T>C), GTC910GTT (23165C>T), TCG911TCT (23168G>T), GAT930GAC (23225T>C), AGC938AAC (23248G>A), CTA944TTA (23265C>T), CTA947TTA (23274C>T), GAT949GAC (23282T>C), CTA951CTG (23288A>G), GGT961CGT (23316G>C), GAT966GAC (23333T>C), AAA971AAG (23348A>G), ACA974ACT (23357A>T), ACT988ACA (23399T>A), TAC991TAT (23408C>T), GCA994GCC (23417A>C), TTG996TTA (23423G>A), GTT1007GTG (23456T>G), CTA1008TTA (23457C>T), CCA1009CCT (23462A>T), GCT1014GAT (23476C>A), TCA1023TCT (23504A>T), TTA1030CTA (23523T>C), GTG1038GTT (23549G>T), GTA1046GTT (23573A>T), CAG1047CAA (23576G>A), CAA1064CAG (23627A>G), GCT1081GCA (23678T>A), GGT1083GGC (23684T>C), CAA1094AAA (23715C>A), GCC1097GCA (23726C>A), GCG1102GCA (23741G>A), AGT1118AGC (23789T>C), CTT1120CTA (23795T>A), AGT1133AGC (23834T>C), GGT1157GGA (23906T>A), GCA1174GCG (23957A>G), AAA1184AAG (23987A>G), AGG1192AGA (24011G>A), TCT1193TCC (24014T>C), CAG1194CAA (24017G>A), TTC1198TTT (24029C>T), CAT1206CAC (24053T>C), CTA1210CTT (24065A>T), GTA1224GTG (24107A>G), ACA1228ACG (24119A>G), TCA1237CCA (24144T>C), TTC1248TTT (24179C>T), GTG1255GTA (24200G>A), AAT1262AAC (24221T>C), ACC1270ACT (24245C>T), GTT1279GCT (24271T>C), GAA1289GAG (24302A>G), TGT1291TGC (24308T>C), AAC1297AAT (24326C>T), GCG1298GCA (24329G>A), GAT1302GAC (24341T>C), ATT1313ATC (24374T>C), CAA1315CAG (24380A>G), GAC1319GAT (24392C>T), TTT1333TTG (24434T>G), TTC1338TTT (24449C>T), GAG1353GAA (24494G>A), CAT1360CAC (24515T>C), AAC1361AAT (24518C>T), ACT1362ACC (24521T>C), ACA1363ACT (24524A>T), GAT1371GAC (24548T>C), AAT1374AAC (24557T>C), AAT1375AAC (24560T>C), CTG1399CTA (24632G>A), GGT1401GGC (24638T>C), GTA1405ATA (24648G>A), CTG1411TTG (24666C>T), TTT1416TGT (24682T>G), AGC1417AGT (24686C>T), TGT1426TGC (24713T>C), ATA1434ATG (24737A>G), CAT1450CAC (24785T>C)
172100%41593.9%72 (100%)69 (95.8%)0/0/0/01
Protein mutations:I9T (24886T>C), F10S (24889T>C), F61I (25041T>A)
Codon mutations:GAC2GAT (24866C>T), ATA9ACA (24886T>C), TTC10TCC (24889T>C), GAC19GAT (24917C>T), GTA25GTT (24935A>T), GAC51GAT (25013C>T), GCG53GCA (25019G>A), TTT61ATT (25041T>A), TAG72TAA (25076G>A)
155100%27396.1%51 (70.8%)49 (68.1%)0/21/0/00
Protein mutations:S19N (25076G>A), R46K (25157G>A), S51_K54del (25171_25182delAGTGTTACAAAA)
Codon mutations:CCT7CCA (25041T>A), AGT19AAT (25076G>A), ACT21ACA (25083T>A), AAA26AAG (25098A>G), TAT31TAC (25113T>C), CTA33TTA (25117C>T), AGA38AGG (25134A>G), AGA46AAA (25157G>A), TTA50TTG (25170A>G), AGT51_AAA54del (25171_25182delAGTGTTACAAAA)
183100%49485.8%83 (100%)65 (78.3%)0/0/0/01
Protein mutations:F7L (25974T>G), I9V (25978A>G), H13N (25990C>A), V17I (26002G>A), V19I (26008G>A), F20I (26011T>A 26013C>T), L23F (26020C>T), S33L (26051C>T), V39I (26068G>A 26070T>A), K51R (26105A>G 26106G>A), I53V (26110A>G), V55I (26116G>A 26118A>T), L56V (26119C>G 26121A>T), R59Q (26129G>A 26130C>A), T67N (26153C>A 26154C>T), Q70R (26162A>G), T71I (26165C>T 26166C>T), F80L (26191T>C 26193T>C)
Codon mutations:CCT4CCC (25965T>C), TTT7TTG (25974T>G), ATC9GTC (25978A>G), CAT13AAT (25990C>A), GGC14GGA (25995C>A), GTT16GTC (26001T>C), GTT17ATT (26002G>A), AGC18AGT (26007C>T), GTC19ATC (26008G>A), TTC20ATT (26011T>A 26013C>T), CTC23TTC (26020C>T), ATT27ATC (26034T>C), TTG31TTA (26046G>A), TCA33TTA (26051C>T), GTT39ATA (26068G>A 26070T>A), AAA41AAG (26076A>G), TTG42CTA (26077T>C 26079G>A), TTG49TTA (26100G>A), GGT50GGA (26103T>A), AAG51AGA (26105A>G 26106G>A), ACT52ACA (26109T>A), ATT53GTT (26110A>G), ATA54ATC (26115A>C), GTA55ATT (26116G>A 26118A>T), CTA56GTT (26119C>G 26121A>T), GCA58GCG (26127A>G), CGC59CAA (26129G>A 26130C>A), GCA61GCT (26136A>T), TAT62TAC (26139T>C), ACC67AAT (26153C>A 26154C>T), TTT68TTC (26157T>C), CAA70CGA (26162A>G), ACC71ATT (26165C>T 26166C>T), AAG72AAA (26169G>A), TAT74TAC (26175T>C), AAT75AAC (26178T>C), GAC77GAT (26184C>T), TTT80CTC (26191T>C 26193T>C), TTG81CTT (26194T>C 26196G>T)
1263100%175094.5%262 (98.9%)245 (92.5%)2/1/0/01
Protein mutations:Y3del (26219_26221delTAC), I11A (26243A>G 26244T>C), I12V (26246A>G), E18_R19insQI (26266_26267insCAAATA), D25E (26287C>G), S26T (26289G>C), Q29S (26297C>T 26298A>C 26299G>A), I31R (26303A>C 26304T>G 26305T>C), N35A (26315A>G 26316A>C 26317T>A), R37D (26321A>G 26322G>A 26323A>T), Q39E (26327C>G 26329A>G), T40S (26330A>T 26332C>A), E43N (26339G>A 26341A>T), R44G (26342C>G 26344T>A), V60I (26390G>A), L79F (26447C>T), Q108E (26534C>G), V137I (26621G>A), S212N (26847G>A)
Codon mutations:TAC3del (26219_26221delTAC), CTA6TTA (26228C>T), CTC8TTA (26234C>T 26236C>A), ATA11GCA (26243A>G 26244T>C), ATT12GTT (26246A>G), TAT16TAC (26260T>C), GGT17GGG (26263T>G), GAA18GAG (26266A>G), GAA18_CGC19insCAAATA (26266_26267insCAAATA), CGC19AGG (26267C>A 26269C>G), GCC22GCT (26278C>T), GAC25GAG (26287C>G), AGT26ACT (26289G>C), GGC27GGT (26293C>T), CAG29TCA (26297C>T 26298A>C 26299G>A), ATT31CGC (26303A>C 26304T>G 26305T>C), GGC33GGT (26311C>T), AAT35GCA (26315A>G 26316A>C 26317T>A), TCA36TCT (26320A>T), AGA37GAT (26321A>G 26322G>A 26323A>T), CAA39GAG (26327C>G 26329A>G), ACC40TCA (26330A>T 26332C>A), TTT42TTC (26338T>C), GAA43AAT (26339G>A 26341A>T), CGT44GGA (26342C>G 26344T>A), GCT52GCA (26368T>A), GTA60ATA (26390G>A), ATT63ATC (26401T>C), ACA67ACG (26413A>G), GTG68GTT (26416G>T), TTA69CTA (26417T>C), GGC72GGT (26428C>T), CCA74CCT (26434A>T), CTC79TTC (26447C>T), GTT80GTG (26452T>G), CTG86CTT (26470G>T), ATC87ATT (26473C>T), CTA96TTG (26498C>T 26500A>G), GCG97GCT (26503G>T), TCT105TCG (26527T>G), GAG106GAA (26530G>A), TAC107TAT (26533C>T), CAA108GAA (26534C>G), ACG125ACA (26587G>A), GTT137ATT (26621G>A), AGA142AGG (26638A>G), AAT150AAC (26662T>C), GAG152GAA (26668G>A), AAT160AAC (26692T>C), GCA161GCG (26695A>G), AGT165AGC (26707T>C), GTG167GTT (26713G>T), CTT168TTG (26714C>T 26716T>G), TTA170CTT (26720T>C 26722A>T), GGT172GGC (26728T>C), ACT173ACA (26731T>A), CCT174CCC (26734T>C), ACA175ACG (26737A>G), ACC178ACT (26746C>T), CTT179CTC (26749T>C), ACT180ACG (26752T>G), TTC191TTT (26785C>T), TTA197CTC (26801T>C 26803A>C), ATC199ATT (26809C>T), GAG200GAA (26812G>A), TTG202TTA (26818G>A), ACA210ACG (26842A>G), AGT212AAT (26847G>A), TAT217TAC (26863T>C), TTA224TTG (26884A>G), ACA230ACG (26902A>G), TAC235TAT (26917C>T), GCT240GCC (26932T>C), GAC250GAT (26962C>T)
1378100%247794.0%377 (99.7%)355 (93.9%)0/1/0/01
Protein mutations:F35Y (27117T>A), Y36F (27120A>T), E42D (27139A>C), L55F (27176C>T), I74A (27233A>G 27234T>C 27235T>G), K84V (27263A>G 27264A>T), A87P (27272G>C), D107A (27333A>C 27334C>T), T126S (27389A>T 27391G>A), R140K (27432G>A), H180Q (27553C>A), H181Q (27556T>G), N187T (27573A>C), E198Q (27605G>C), P212S (27647C>T), R213G (27650A>G), D217Q (27662G>C 27664T>G), P220S (27671C>T 27673T>C), T244N (27744C>A), I284L (27863A>C), T305N (27927C>A 27928C>T), R339K (28029G>A), V357del (28082_28084delGTG)
Codon mutations:AAA16AAG (27061A>G), TTG33CTT (27110T>C 27112G>T), TTC35TAC (27117T>A), TAC36TTC (27120A>T), ATT39ATC (27130T>C), GAA42GAC (27139A>C), TCT45TCA (27148T>A), AAA46AAG (27151A>G), AAT49AAC (27160T>C), CTT55TTT (27176C>T), AAA58AAG (27187A>G), AAG63AAA (27202G>A), CAA66CAG (27211A>G), GGT68GGC (27217T>C), AAT71AAC (27226T>C), ATT74GCG (27233A>G 27234T>C 27235T>G), TAT76TAC (27241T>C), CGT77CGC (27244T>C), GTA79GTC (27250A>C), GGC81GGA (27256C>A), AAG84GTG (27263A>G 27264A>T), GCT87CCT (27272G>C), GAG88GAA (27277G>A), AGG89AGA (27280G>A), TTT92TTC (27289T>C), CAT100CAC (27313T>C), GCT103GCC (27322T>C), TTC105TTT (27328C>T), AAA106AAG (27331A>G), GAC107GCT (27333A>C 27334C>T), GAT110GAC (27343T>C), GGA111GGT (27346A>T), CCC124CCA (27385C>A), ACG126TCA (27389A>T 27391G>A), AAT133AAC (27412T>C), AAC134AAT (27415C>T), AGA140AAA (27432G>A), TTT141TTC (27436T>C), CCG146CCA (27451G>A), CAG148CAA (27457G>A), TTT149TTC (27460T>C), TCA160TCC (27493A>C), TCT164TCC (27505T>C), CAC180CAA (27553C>A), CAT181CAG (27556T>G), AAT187ACT (27573A>C), ATT193ATC (27592T>C), GAA198CAA (27605G>C), AAA205AAG (27628A>G), CCT212TCT (27647C>T), AGA213GGA (27650A>G), GAT217CAG (27662G>C 27664T>G), AAA219AAG (27670A>G), CCT220TCC (27671C>T 27673T>C), ACT236ACC (27721T>C), GGC238GGT (27727C>T), GGA240GGT (27733A>T), ACT244AAT (27744C>A), ATC284CTC (27863A>C), CTC302CTT (27919C>T), ACC305AAT (27927C>A 27928C>T), TAC306TAT (27931C>T), AAG310AAA (27943G>A), ACT315ACC (27958T>C), AGT316AGC (27961T>C), GAC323GAT (27982C>T), TAC325TAT (27988C>T), CGA327CGT (27994A>T), AGA339AAA (28029G>A), GAG351GAA (28066G>A), GTG357del (28082_28084delGTG), ATT372ATC (28129T>C), GTT375GTA (28138T>A)
1102100%62999.4%102 (100%)101 (99.0%)0/0/0/01
Protein mutations:V5L (28164G>C)
Codon mutations:TTC4TTT (28163C>T), GTC5CTC (28164G>C), CTT35CTC (28256T>C), ACA36ACG (28259A>G), GTC38GTT (28265C>T), AGT48AGC (28295T>C), CGT50CGA (28301T>A), AAT52AAC (28307T>C), TGT53TGC (28310T>C), TTG54TTA (28313G>A), AAT65AAC (28346T>C), AGG75AGA (28376G>A)
1185100%68084.4%128 (61.8%)112 (54.1%)0/79/0/00
Protein mutations:I5V (28474A>G), N22P (28525A>C 28526A>C), I39V (28576A>G 28578A>T), H41N (28582C>A 28584T>C), G63S (28648G>A), I64V (28651A>G 28653C>T), E65D (28656A>T), W71R (28672T>C), D76N (28687G>A), P77S (28690C>T), S103V (28768A>G 28769G>T), R108K (28784G>A), N124K (28833T>A), V125L (28834G>C 28836T>G), G126S (28837G>A), C127_V183del (28840_29010delTGTCATACATCATTTGCTGTTGATCTTCCATTTGGGATTCAGATATACCATGACAGGGATTTTCAACACCCTGTTGATGGCAGACATCTAGATTGTACTCACAGAGTGTACTTTGTGAAGTACTGTCCACATAACCTGCATGGTTATTGCTTTAATGAGAGGCTGAAAGTT), D185K (29014G>A 29016C>G)
Codon mutations:ATC5GTC (28474A>G), AAT22CCT (28525A>C 28526A>C), CCC28CCA (28545C>A), GTT29GTC (28548T>C), ACC31ACT (28554C>T), GAT33GAC (28560T>C), TTA34TTG (28563A>G), TTA35TTG (28566A>G), CAG36CAA (28569G>A), TTC38TTT (28575C>T), ATA39GTT (28576A>G 28578A>T), CAT41AAC (28582C>A 28584T>C), CTC43CTT (28590C>T), ATT45ATC (28596T>C), ACA46ACC (28599A>C), CCG54CCT (28623G>T), GGA56GGG (28629A>G), TCT57TCA (28632T>A), GTT59GTG (28638T>G), GGT63AGT (28648G>A), ATC64GTT (28651A>G 28653C>T), GAA65GAT (28656A>T), TGG71CGG (28672T>C), GAT76AAT (28687G>A), CCT77TCT (28690C>T), TAC85TAT (28716C>T), TCA94TCC (28743A>C), GTA96GTG (28749A>G), AGT103GTT (28768A>G 28769G>T), GAG104GAA (28773G>A), AGA108AAA (28784G>A), TTG113TTA (28800G>A), AAT124AAA (28833T>A), GTT125CTG (28834G>C 28836T>G), GGT126AGT (28837G>A), TGT127_GTT183del (28840_29010delTGTCATACATCATTTGCTGTTGATCTTCCATTTGGGATTCAGATATACCATGACAGGGATTTTCAACACCCTGTTGATGGCAGACATCTAGATTGTACTCACAGAGTGTACTTTGTGAAGTACTGTCCACATAACCTGCATGGTTATTGCTTTAATGAGAGGCTGAAAGTT), GAC185AAG (29014G>A 29016C>G)
Proteins
16710100%4537297.1%6673 (99.4%)6398 (95.4%)0/37/0/01
Protein mutations:A26V (387C>T 388A>G), Y34F (411A>T), C54S (470T>A 472C>T), F104V (620T>G 622C>T), V140I (728G>A), W162C (796G>T), K196R (897A>G 898G>A), N225S (984A>G), T226K (987C>A), I280V (1148A>G), V281I (1151G>A), T315A (1253A>G), R336K (1317G>A), A366T (1406G>A 1408A>G), M386T (1467T>C 1468G>A), A398S (1502G>T 1504T>G), S496G (1796A>G), V521I (1871G>A), S530A (1898T>G 1900A>T), Y532N (1904T>A 1906C>T), G546E (1947G>A), I552V (1964A>G), V584A (2061T>C 2062G>A), K655R (2274A>G 2275G>A), Q672R (2325A>G 2326A>C), G675D (2334G>A), T699A (2405A>G), I704L (2420A>C), A724T (2480G>A), K728T (2493A>C 2494G>A), V745I (2543G>A), F752L (2564T>C 2566T>G), I758V (2582A>G), N761S (2592A>G 2593T>C), L805F (2723C>T 2725C>T), I819T (2766T>C), D841G (2832A>G), N891I (2982A>T), R893K (2988G>A), E896K (2996G>A), I927T (3090T>C), E932D (3106A>T), K941E (3131A>G), K944R (3141A>G), A987V (3270C>T), D992N (3284G>A 3286T>C), L1002S (3315T>C), I1012T (3345T>C 3346T>C), T1017V (3359A>G 3360C>T), D1020A (3369A>C), D1021A (3372A>C), A1022V (3375C>T), V1025A (3384T>C), S1026V (3386T>G 3387C>T 3388A>G), S1034A (3410T>G), V1036S (3416G>T 3417T>C 3418C>T), F1041_S1065del (3431_3505delTTTGTTGAACAAGTTTCGCTCGTAGAAGAAAATAATGTTTTAACTCCTGCTGTAAACCCTGATGAGCAACTTTCC), K1069E (3515A>G), D1071V (3522A>T), A1082V (3555C>T), P1094H (3591C>A), L1096F (3598G>T), T1097S (3599A>T 3601C>A), K1100R (3609A>G), N1103D (3617A>G), I1119V (3665A>G 3667A>G), N1133K (3709C>A), G1139N (3725G>A 3726G>A), K1142N (3736A>T), D1143G (3738A>G 3739T>C), D1150N (3758G>A 3760C>T), L1156M (3776C>A 3778A>G), K1159Q (3785A>C), D1162A (3795A>C 3796T>C), T1183I (3858C>T 3859A>T), S1185N (3864G>A 3865T>C), V1192N (3884G>A 3885T>A), R1208K (3933G>A), I1222T (3975T>C 3976T>C), K1226R (3987A>G 3988G>A), S1248T (4052T>A), I1251V (4061A>G), T1253P (4067A>C 4069A>G), T1255V (4073A>G 4074C>T 4075T>C), T1264P (4100A>C), K1291R (4182A>G), N1302T (4215A>C), K1307E (4229A>G), S1308P (4232T>C), M1311T (4242T>C), V1312I (4244G>A), E1313_E1319del (4247_4267delGAACCACCTGTGCCCGTAGAG), D1325E (4285C>A), I1333L (4307A>T), L1334T (4310C>A 4311T>C), K1338A (4322A>G 4323A>C 4324A>G), A1339V (4326C>T 4327G>A), V1342I (4334G>A 4336C>T), V1351I (4361G>A), I1353V (4367A>G), L1361V (4391C>G), R1377K (4440G>A), V1381A (4452T>C), K1389S (4476A>G 4477A>C), K1392R (4485A>G 4486G>A), S1398N (4503G>A 4504C>T), A1400S (4508G>T), D1446E (4648T>A), V1465T (4703G>A 4704T>C 4705T>A), L1471I (4721C>A), V1474I (4730G>A), Q1487H (4771A>T), V1490T (4778G>A 4779T>C), N1497K (4801T>A), I1502V (4814A>G), K1503N (4819G>T), Q1511H (4843A>C), Q1540H (4930G>T), S1543N (4938G>A), V1551I (4961G>A), V1557I (4979G>A), N1560S (4989A>G), Y1562H (4994T>C 4996C>T), A1570V (5019C>T), E1580Q (5048G>C), V1601I (5111G>A), T1629M (5196C>T), G1644S (5240G>A), T1646K (5247C>A), V1661G (5292T>G), D1662E (5296T>G), D1667N (5309G>A), L1697M (5399T>A), V1698I (5402G>A 5404T>C), I1704T (5421T>C), H1710S (5438C>A 5439A>G), I1718V (5462A>G), A1723V (5478C>T), G1761S (5591G>A), D1767E (5611T>G), A1789V (5676C>T), N1790K (5680C>A), K1794I (5691A>T 5692G>A), I1796N (5697T>A), M1797S (5699A>T 5700T>C), T1800N (5709C>A), A1802V (5715C>T), S1805P (5723T>C), K1806S (5727A>G 5728A>C), A1807_N1811del (5729_5743delGCTAAAGAATCAAAT), T1812K (5745C>A), A1813T (5747G>A 5749T>C), N1822T (5775A>C), R1828C (5792C>T), K1829E (5795A>G 5797A>G), E1830P (5798G>C 5799A>C 5800A>T), T1844S (5840A>T), L1846F (5846C>T), V1852M (5864G>A 5866A>G), A1856T (5876G>A), I1860V (5888A>G 5890T>A), V1886F (5966G>T), V1893A (5988T>C), R1895K (5994G>A), N1896D (5996A>G), V1901I (6011G>A), I1919A (6065A>G 6066T>C), K1943R (6138A>G), S1954G (6170A>G), S1989A (6275T>G 6277A>G), I2002V (6314A>G), I2008M (6334A>G), L2021V (6371C>G), V2026I (6386G>A 6388C>T), V2063I (6497G>A 6499G>A), L2076F (6536C>T 6538A>T), M2105L (6623A>C), L2147V (6749C>G), I2151V (6761A>G), T2171S (6821A>T 6823C>T), E2181D (6853A>C), H2192N (6884C>A 6886T>C), S2197G (6899A>G), I2299V (7205A>G), N2300T (7209A>C), T2366A (7406A>G 7408T>A), L2426I (7586C>A), F2427S (7590T>C 7591C>T), L2432F (7606G>T), T2435I (7614C>T 7615C>T), L2436V (7616C>G 7618T>G), V2445L (7643G>C), S2469P (7715T>C), H2492Y (7784C>T), N2566S (8007A>G), T2573S (8027A>T), I2575L (8033A>C), L2598M (8102C>A), A2615S (8153G>T), S2619G (8165A>G), F2620L (8168T>C), T2639I (8226C>T), E2640D (8230A>C), T2669A (8315A>G), L2670M (8318T>A), L2694M (8390T>A), V2698I (8402G>A 8404T>C), V2749I (8555G>A 8557T>C), V2766I (8606G>A), L2776V (8636T>G), I2788V (8672A>G), V2790M (8678G>A), L2792F (8684C>T 8686T>C), N2850A (8858A>G 8859A>C 8860C>A), V2915I (9053G>A), V2916I (9056G>A 9058G>T), A2975V (9234C>T), E3080V (9549A>T), T3125S (9683A>T), T3128S (9692A>T), S3206G (9926A>G), I3212L (9944A>C), M3216V (9956A>G), V3247I (10049G>A), I3278V (10142A>G), V3297F (10199G>T 10201G>C), I3326T (10287T>C), C3327Y (10290G>A), I3346V (10346A>G), F3368I (10412T>A), A3392I (10484G>A 10485C>T), V3396F (10496G>T), V3419I (10565G>A), G3490E (10779G>A), A3546V (10947C>T 10948C>T), A3658T (11282G>A), E3740A (11529A>C 11530G>A), I3768L (11612A>T), G3813C (11747G>T), D3853E (11869T>A), G3900S (12008G>A), S3949A (12155T>G), F3980Y (12249T>A), V3987I (12269G>A), T4012N (12345C>A 12346T>C), I4022M (12376A>G), G4024S (12380G>A 12382C>T), T4025S (12383A>T 12385C>T), I4027V (12389A>G), V4090I (12577G>A 12579A>T), S4097T (12599G>C), V4114A (12650T>C 12651A>T), L4122N (12673T>A 12674T>A 12675G>C), K4136R (12716A>G), D4137N (12718G>A), L4168V (12811T>G), N4172T (12824A>C), S4174E (12829T>G 12830C>A 12831T>A), R4196K (12896G>A), T4245A (13042A>G 13044G>T), A4283S (13156G>T), D4297E (13200C>A), K4301Y (13210A>T 13212A>C), H4304Q (13221T>A), H4309Y (13234C>T), D4311E (13242T>G), S4343M (13337G>T 13338T>G), V5382M (16453G>A), A5454S (16669G>T), M5805I (17724G>T), T6086A (18565A>G 18567T>C), V6182S (18853G>T 18854T>C), N6208S (18932A>G), E6247D (19050G>T), H6258Q (19083T>G), T6332N (19304C>A), R6443K (19637G>A), A6575V (20033C>T)
Codon mutations:TAC14TAT (352C>T), GTT18GTG (364T>G), GCA26GTG (387C>T 388A>G), CTG27TTG (389C>T), ATT30ATC (400T>C), TAC34TTC (411A>T), GTC42GTT (436C>T), TGC54AGT (470T>A 472C>T), ATT62ATC (496T>C), GGT66GGC (508T>C), GGA68GGT (514A>T), TTG84CTA (560T>C 562G>A), CAG85CAA (565G>A), GGT86GGC (568T>C), TTC87TTT (571C>T), AGA90AGG (580A>G), GCC91GCT (583C>T), TTC104GTT (620T>G 622C>T), GGA108GGG (634A>G), GGC110GGG (640C>G), GTG114GTA (652G>A), GAC115GAT (655C>T), GCT121GCC (673T>C), AAG124AAA (682G>A), ATT127ATC (691T>C), GTT140ATT (728G>A), ATC142ATT (736C>T), GAG147GAA (751G>A), TAC148TAT (754C>T), TGT150TGC (760T>C), GCC151GCT (763C>T), CTA153TTA (767C>T), ACA154ACT (772A>T), TTA161TTG (793A>G), TGG162TGT (796G>T), CTC166CTT (808C>T), CTT167CTC (811T>C), AAC175AAT (835C>T), GAT177GAC (841T>C), ATC187ATT (871C>T), GAG189GAA (877G>A), AAG196AGA (897A>G 898G>A), AAT197AAC (901T>C), AAG199AAA (907G>A), CTT202CTC (916T>C), TAT210TAC (940T>C), GGC214GGT (952C>T), TCG215TCA (955G>A), GGC219GGT (967C>T), AAC225AGC (984A>G), ACG226AAG (987C>A), CTT231CTC (1003T>C), CAC232CAT (1006C>T), ATT234ATC (1012T>C), GCT235GCC (1015T>C), GCC236GCT (1018C>T), ACC237ACT (1021C>T), GGC243GGT (1039C>T), GAT251GAC (1063T>C), GGC254GGG (1072C>G), CTC262CTT (1096C>T), CCA276CCG (1138A>G), GCC279GCT (1147C>T), ATT280GTT (1148A>G), GTC281ATC (1151G>A), GTA297GTG (1201A>G), ACT315GCT (1253A>G), ACT321ACC (1273T>C), GTC322GTT (1276C>T), TTT327TTC (1291T>C), AGA336AAA (1317G>A), ACT340ACC (1330T>C), TCG341TCA (1333G>A), TCA344TCG (1342A>G), GCT350GCC (1360T>C), ATC352ATT (1366C>T), ACA353ACT (1369A>T), GAA355GAG (1375A>G), GCA366ACG (1406G>A 1408A>G), AAT374AAC (1432T>C), AAA385AAG (1465A>G), ATG386ACA (1467T>C 1468G>A), GCT398TCG (1502G>T 1504T>G), GAA405GAG (1525A>G), CTT408CTA (1534T>A), ATT418ATC (1564T>C), TAT419TAC (1567T>C), GTA422GTG (1576A>G), GCA423GCT (1579A>T), CTC425CTT (1585C>T), TCT428TCA (1594T>A), GTA438GTG (1624A>G), GTT446GTA (1648T>A), GTT454GTC (1672T>C), AAA459AAG (1687A>G), GCC460GCT (1690C>T), TTC461TTT (1693C>T), ACC469ACA (1717C>A), GTA473GTG (1729A>G), TGC477TGT (1741C>T), GTG479GTT (1747G>T), AAT489AAC (1777T>C), GTT492GTC (1786T>C), AGT496GGT (1796A>G), GGT501GGC (1813T>C), CAA504CAG (1822A>G), TTT512TTC (1846T>C), AAC515AAT (1855C>T), ATT517ATA (1861T>A), GCT519GCG (1867T>G), ACT520ACC (1870T>C), GTT521ATT (1871G>A), CAA526CAG (1888A>G), CGG527AGA (1889C>A 1891G>A), TCA530GCT (1898T>G 1900A>T), TAC532AAT (1904T>A 1906C>T), AGC534AGT (1912C>T), CTG535TTG (1913C>T), GAT539GAC (1927T>C), GAC540GAT (1930C>T), ACG543ACA (1939G>A), CCT544CCA (1942T>A), GGA546GAA (1947G>A), ATT552GTT (1964A>G), GGT553GGC (1969T>C), GAA562GAG (1996A>G), TAT564TAC (2002T>C), AGC569AGT (2017C>T), GTT578GTC (2044T>C), GCC581GCG (2053C>G), GCG582GCT (2056G>T), GTG584GCA (2061T>C 2062G>A), ATA605ATT (2125A>T), TTC609TTT (2137C>T), GAC614GAT (2152C>T), GAT616GAC (2158T>C), GCG638GCA (2224G>A), CTA646TTG (2246C>T 2248A>G), AAG653AAA (2269G>A), AAG655AGA (2274A>G 2275G>A), AAC662AAT (2296C>T), TTA666TTG (2308A>G), CGA671AGA (2321C>A), CAA672CGC (2325A>G 2326A>C), TCC674TCT (2332C>T), GGT675GAT (2334G>A), ACC699GCC (2405A>G), ATT704CTT (2420A>C), CTC708CTT (2434C>T), CTG710CTA (2440G>A), TAC719TAT (2467C>T), GCA724ACA (2480G>A), TGC725TGT (2485C>T), TCT726TCG (2488T>G), GAC727GAT (2491C>T), AAG728ACA (2493A>C 2494G>A), ATT730ATC (2500T>C), TTA731CTA (2501T>C), GGC739GGT (2527C>T), GTA744GTG (2542A>G), GTT745ATT (2543G>A), GGT748GGC (2554T>C), CAC750CAT (2560C>T), AGT751AGC (2563T>C), TTT752CTG (2564T>C 2566T>G), AAT754AAC (2572T>C), ACG757ACT (2581G>T), ATT758GTT (2582A>G), TAC760TAT (2590C>T), AAT761AGC (2592A>G 2593T>C), AAA769AAG (2617A>G), AAA792AAG (2686A>G), ATC795ATT (2695C>T), CTC805TTT (2723C>T 2725C>T), ATC819ACC (2766T>C), ATT820ATC (2770T>C), GAT823GAC (2779T>C), GAC841GGC (2832A>G), TAC851TAT (2863C>T), AAA872AAG (2926A>G), AAC875AAT (2935C>T), GAC888GAT (2974C>T), GTT890GTC (2980T>C), AAT891ATT (2982A>T), AGA893AAA (2988G>A), GAA896AAA (2996G>A), GAA904GAG (3022A>G), GAG910GAA (3040G>A), ATT920ATC (3070T>C), ACC922ACT (3076C>T), TAT924TAC (3082T>C), AAA925AAG (3085A>G), ATA927ACA (3090T>C), ACC929ACG (3097C>G), GAA932GAT (3106A>T), GAG933GAA (3109G>A), TCC939TCT (3127C>T), AAA941GAA (3131A>G), CTT942CTC (3136T>C), AAA944AGA (3141A>G), GAG951GAA (3163G>A), GGC958GGT (3184C>T), TAT959TAC (3187T>C), AAT971AAC (3223T>C), ATT978ATC (3244T>C), TAC981TAT (3253C>T), GCT987GTT (3270C>T), GAT992AAC (3284G>A 3286T>C), GCA995GCG (3295A>G), AGT996AGC (3298T>C), TTG1002TCG (3315T>C), ATT1012ACC (3345T>C 3346T>C), GAA1014GAG (3352A>G), ACT1017GTT (3359A>G 3360C>T), TCA1018TCT (3364A>T), GAT1020GCT (3369A>C), GAT1021GCT (3372A>C), GCT1022GTT (3375C>T), GAT1024GAC (3382T>C), GTT1025GCT (3384T>C), TCA1026GTG (3386T>G 3387C>T 3388A>G), TCT1027TCA (3391T>A), GTA1028GTT (3394A>T), GAA1031GAG (3403A>G), TCA1034GCA (3410T>G), GTC1036TCT (3416G>T 3417T>C 3418C>T), GAT1037GAC (3421T>C), GAA1039GAG (3427A>G), TTT1041_TCC1065del (3431_3505delTTTGTTGAACAAGTTTCGCTCGTAGAAGAAAATAATGTTTTAACTCCTGCTGTAAACCCTGATGAGCAACTTTCC), TCA1066TCT (3508A>T), AAA1069GAA (3515A>G), GAT1071GTT (3522A>T), GTC1073GTT (3529C>T), CCG1079CCA (3547G>A), GCT1082GTT (3555C>T), CCT1094CAT (3591C>A), TTG1096TTT (3598G>T), ACC1097TCA (3599A>T 3601C>A), CCA1098CCT (3604A>T), TTC1099TTT (3607C>T), AAG1100AGG (3609A>G), ACA1101ACG (3613A>G), AAT1103GAT (3617A>G), ATC1108ATT (3634C>T), ATA1119GTG (3665A>G 3667A>G), AAC1120AAT (3670C>T), TAT1124TAC (3682T>C), TTG1126CTG (3686T>C), GCC1128GCT (3694C>T), TTT1129TTC (3697T>C), AAC1133AAA (3709C>A), GAT1135GAC (3715T>C), TTG1136CTG (3716T>C), GGT1139AAT (3725G>A 3726G>A), AAA1142AAT (3736A>T), GAT1143GGC (3738A>G 3739T>C), GTT1145GTC (3745T>C), CCT1147CCC (3751T>C), GTA1149GTG (3757A>G), GAC1150AAT (3758G>A 3760C>T), CTA1156ATG (3776C>A 3778A>G), ACT1157ACC (3781T>C), TTG1158TTA (3784G>A), AAG1159CAG (3785A>C), GAT1162GCC (3795A>C 3796T>C), TCA1163TCT (3799A>T), GGG1164GGA (3802G>A), GAA1167GAG (3811A>G), CTT1169CTC (3817T>C), GTC1182GTA (3856C>A), ACA1183ATT (3858C>T 3859A>T), AGT1185AAC (3864G>A 3865T>C), GCT1186GCC (3868T>C), GTT1192AAT (3884G>A 3885T>A), TTA1197TTG (3901A>G), GAA1198GAG (3904A>G), CGA1199AGA (3905C>A), ACT1200ACC (3910T>C), AAG1203AAA (3919G>A), ACA1205ACT (3925A>T), CCT1206CCA (3928T>A), AGG1208AAG (3933G>A), AAG1220AAA (3970G>A), ATT1222ACC (3975T>C 3976T>C), AAG1226AGA (3987A>G 3988G>A), GCT1228GCA (3994T>A), AGC1229AGT (3997C>T), GTG1230GTA (4000G>A), GGT1232GGA (4006T>A), GTT1237GTC (4021T>C), AGA1240AGG (4030A>G), ATT1241ATA (4033T>A), CAG1244CAA (4042G>A), CCT1246CCA (4048T>A), TCA1248ACA (4052T>A), ATT1251GTT (4061A>G), ACA1253CCG (4067A>C 4069A>G), ACT1255GTC (4073A>G 4074C>T 4075T>C), ACA1264CCA (4100A>C), AAA1286AAG (4168A>G), AAG1291AGG (4182A>G), ACT1296ACA (4198T>A), AAT1302ACT (4215A>C), AAA1307GAA (4229A>G), TCT1308CCT (4232T>C), ATG1311ACG (4242T>C), GTT1312ATT (4244G>A), GAA1313_GAG1319del (4247_4267delGAACCACCTGTGCCCGTAGAG), GAC1325GAA (4285C>A), CTT1332CTC (4306T>C), ATA1333TTA (4307A>T), CTA1334ACA (4310C>A 4311T>C), CCC1335CCT (4315C>T), TAT1337TAC (4321T>C), AAA1338GCG (4322A>G 4323A>C 4324A>G), GCG1339GTA (4326C>T 4327G>A), GTC1342ATT (4334G>A 4336C>T), TAC1345TAT (4345C>T), GTT1351ATT (4361G>A), ATT1353GTT (4367A>G), TTT1355TTC (4375T>C), GTC1360GTT (4390C>T), CTT1361GTT (4391C>G), CAC1371CAT (4423C>T), GTG1372GTA (4426G>A), GGC1374GGT (4432C>T), AGA1377AAA (4440G>A), GCT1378GCC (4444T>C), GTA1381GCA (4452T>C), GGT1385GGC (4465T>C), AAA1389AGC (4476A>G 4477A>C), AAG1392AGA (4485A>G 4486G>A), GAG1393GAA (4489G>A), TAC1394TAT (4492C>T), AGC1398AAT (4503G>A 4504C>T), AAA1399AAG (4507A>G), GCA1400TCA (4508G>T), AAC1411AAT (4543C>T), TTG1419TTA (4567G>A), GAC1428GAT (4594C>T), CTC1435CTT (4615C>T), ATC1442ATT (4636C>T), GCT1443GCC (4639T>C), GAT1446GAA (4648T>A), AAG1448AAA (4654G>A), CTA1450TTA (4658C>T), ATC1458ATT (4684C>T), CTG1463CTT (4699G>T), GTT1465ACA (4703G>A 4704T>C 4705T>A), TCG1466TCA (4708G>A), TTG1467CTG (4709T>C), CTA1470TTA (4718C>T), CTT1471ATT (4721C>A), GTC1474ATC (4730G>A), ACA1475ACT (4735A>T), AGA1477AGG (4741A>G), TTA1479TTG (4747A>G), TTT1482TTC (4756T>C), CAA1487CAT (4771A>T), GTT1490ACT (4778G>A 4779T>C), AAT1497AAA (4801T>A), ATT1500ATC (4810T>C), CCT1501CCA (4813T>A), ATC1502GTC (4814A>G), AAG1503AAT (4819G>T), GAT1507GAC (4831T>C), GTG1509GTA (4837G>A), CAA1511CAC (4843A>C), AAG1512AAA (4846G>A), GTA1516GTG (4858A>G), GAG1524GAA (4882G>A), CTC1526CTT (4888C>T), GGA1528GGG (4894A>G), GTT1530GTC (4900T>C), GAC1534GAT (4912C>T), AAA1535AAG (4915A>G), GTT1537GTC (4921T>C), ACT1538ACC (4924T>C), CAG1540CAT (4930G>T), CCA1542CCT (4936A>T), AGT1543AAT (4938G>A), TCA1545TCT (4945A>T), GAT1546GAC (4948T>C), GTC1547GTT (4951C>T), GTC1551ATC (4961G>A), GTT1552GTC (4966T>C), GCA1554GCT (4972A>T), TTG1555TTA (4975G>A), GTT1557ATT (4979G>A), GAT1558GAC (4984T>C), AAT1560AGT (4989A>G), GCT1561GCA (4993T>A), TAC1562CAT (4994T>C 4996C>T), GCA1569GCG (5017A>G), GCT1570GTT (5019C>T), TCC1575TCT (5035C>T), GAA1580CAA (5048G>C), GTT1601ATT (5111G>A), GCA1626GCC (5188A>C), ACG1629ATG (5196C>T), GTA1636GTC (5218A>C), TCG1643TCA (5239G>A), GGC1644AGC (5240G>A), ACG1646AAG (5247C>A), GGC1651GGT (5263C>T), GCC1653GCT (5269C>T), GTT1661GGT (5292T>G), GAT1662GAG (5296T>G), GAT1667AAT (5309G>A), GTT1670GTC (5320T>C), CAC1674CAT (5332C>T), GCT1682GCA (5356T>A), ACA1688ACT (5374A>T), GGT1689GGA (5377T>A), GTA1692GTG (5386A>G), TTG1697ATG (5399T>A), GTT1698ATC (5402G>A 5404T>C), GGC1700GGA (5410C>A), ATT1704ACT (5421T>C), CAT1710AGT (5438C>A 5439A>G), AGC1717AGT (5461C>T), ATT1718GTT (5462A>G), ACT1721ACC (5473T>C), GCT1723GTT (5478C>T), ATC1724ATT (5482C>T), TTA1727TTG (5491A>G), GGT1733GGA (5509T>A), GAC1734GAT (5512C>T), TGC1743TGT (5539C>T), TAC1744TAT (5542C>T), GGT1746GGG (5548T>G), TCG1749TCA (5557G>A), TAT1753TAC (5569T>C), GAT1757GAC (5581T>C), GGT1761AGT (5591G>A), GCC1766GCT (5608C>T), GAT1767GAG (5611T>G), TTC1772TTT (5626C>T), GTC1779GTT (5647C>T), ATT1783ATC (5659T>C), AAT1786AAC (5668T>C), GCT1789GTT (5676C>T), AAC1790AAA (5680C>A), ACG1791ACA (5683G>A), AAG1794ATA (5691A>T 5692G>A), ATT1796AAT (5697T>A), ATG1797TCG (5699A>T 5700T>C), ACT1800AAT (5709C>A), GCT1802GTT (5715C>T), AAA1803AAG (5719A>G), TCA1805CCA (5723T>C), AAA1806AGC (5727A>G 5728A>C), GCT1807_AAT1811del (5729_5743delGCTAAAGAATCAAAT), ACG1812AAG (5745C>A), GCT1813ACC (5747G>A 5749T>C), GAA1821GAG (5773A>G), AAT1822ACT (5775A>C), GTT1827GTG (5791T>G), CGT1828TGT (5792C>T), AAA1829GAG (5795A>G 5797A>G), GAA1830CCT (5798G>C 5799A>C 5800A>T), GCT1834GCA (5812T>A), GAT1840GAC (5830T>C), ACA1844TCA (5840A>T), CTC1846TTC (5846C>T), GTA1852ATG (5864G>A 5866A>G), GCT1856ACT (5876G>A), GAT1858GAC (5884T>C), ATT1860GTA (5888A>G 5890T>A), CTC1864CTA (5902C>A), TAT1870TAC (5920T>C), TTA1871CTG (5921T>C 5923A>G), GTT1873GTC (5929T>C), TCT1881TCA (5953T>A), GTT1886TTT (5966G>T), GTA1888GTC (5974A>C), CCA1891CCG (5983A>G), GTA1893GCA (5988T>C), AGA1895AAA (5994G>A), AAC1896GAC (5996A>G), TTG1897TTA (6001G>A), GTT1901ATT (6011G>A), AGA1902AGG (6016A>G), TAT1906TAC (6028T>C), AGA1908CGA (6032A>C), CCA1913CCT (6049A>T), CTG1915CTA (6055G>A), TAC1918TAT (6064C>T), ATA1919GCA (6065A>G 6066T>C), CTA1923TTA (6077C>T), TTT1931TTC (6103T>C), TTC1932TTT (6106C>T), AAA1943AGA (6138A>G), TTG1944TTA (6142G>A), AGT1954GGT (6170A>G), AAG1960AAA (6190G>A), TCG1961TCA (6193G>A), AAT1966AAC (6208T>C), TTG1969CTG (6215T>C), TGC1970TGT (6220C>T), GAT1984GAC (6262T>C), CAG1987CAA (6271G>A), TCA1989GCG (6275T>G 6277A>G), TAC1992TAT (6286C>T), CCA1996CCC (6298A>C), ATA2002GTA (6314A>G), TCG2005TCC (6325G>C), ATA2008ATG (6334A>G), TTC2009TTT (6337C>T), AAC2015AAT (6355C>T), CTT2021GTT (6371C>G), TAT2024TAC (6382T>C), GTC2026ATT (6386G>A 6388C>T), TCC2027TCT (6391C>T), CTT2030CTC (6400T>C), TTA2034CTG (6410T>C 6412A>G), TAT2036TAC (6418T>C), AGC2043AGT (6439C>T), TCA2053TCT (6469A>T), TCT2055TCC (6475T>C), GTG2063ATA (6497G>A 6499G>A), CTA2076TTT (6536C>T 6538A>T), AAC2079AAT (6547C>T), AAC2080AAT (6550C>T), CCG2081CCT (6553G>T), AAG2084AAA (6562G>A), ACA2085ACT (6565A>T), TGT2086TGC (6568T>C), ACG2093ACA (6589G>A), CGC2094CGT (6592C>T), CCT2096CCC (6598T>C), ATG2105CTG (6623A>C), GTG2108GTT (6634G>T), GTC2110GTT (6640C>T), TGC2119TGT (6667C>T), AAC2123AAT (6679C>T), GAC2130GAT (6700C>T), GAT2135GAC (6715T>C), GAT2141GAC (6733T>C), CTA2147GTA (6749C>G), ATT2151GTT (6761A>G), GAT2159GAC (6787T>C), AGG2160AGA (6790G>A), TCA2161TCG (6793A>G), TAC2162TAT (6796C>T), GTC2165GTT (6805C>T), TGT2170TGC (6820T>C), ACC2171TCT (6821A>T 6823C>T), GAC2172GAT (6826C>T), GGG2173GGA (6829G>A), TAT2175TAC (6835T>C), TTC2177TTT (6841C>T), GAA2181GAC (6853A>C), TAT2186TAC (6868T>C), CAT2192AAC (6884C>A 6886T>C), TAT2195TAC (6895T>C), AGT2197GGT (6899A>G), CAG2198CAA (6904G>A), GAG2199GAA (6907G>A), ACA2203ACT (6919A>T), TTC2205TTT (6925C>T), CTG2206TTG (6926C>T), GAT2208GAC (6934T>C), GTT2212GTC (6946T>C), TAC2213TAT (6949C>T), AAC2214AAT (6952C>T), GGG2217GGT (6961G>T), AGT2222AGC (6976T>C), GTT2223GTC (6979T>C), AAC2225AAT (6985C>T), GTC2226GTA (6988C>A), TAC2229TAT (6997C>T), ATC2240ATT (7030C>T), GCC2260GCT (7090C>T), AAC2267AAT (7111C>T), CTC2288CTT (7174C>T), ACT2294ACC (7192T>C), ATT2299GTT (7205A>G), AAT2300ACT (7209A>C), CGA2312CGG (7246A>G), ATT2322ATC (7276T>C), CCT2324CCC (7282T>C), GAT2333GAC (7309T>C), CTC2360CTA (7390C>A), AGT2361AGC (7393T>C), CAG2362CAA (7396G>A), TTC2364TTT (7402C>T), TCC2365TCT (7405C>T), ACT2366GCA (7406A>G 7408T>A), GTG2380GTA (7450G>A), AAT2385AAC (7465T>C), GTT2393GTG (7489T>G), CTG2399TTG (7505C>T), CCG2400CCA (7510G>A), CGG2403CGA (7519G>A), TCT2407TCA (7531T>A), TCG2409TCT (7537G>T), GGT2415GGC (7555T>C), CTC2426ATC (7586C>A), TTC2427TCT (7590T>C 7591C>T), CTT2430TTG (7598C>T 7600T>G), GTT2431GTC (7603T>C), TTG2432TTT (7606G>T), ACC2435ATT (7614C>T 7615C>T), CTT2436GTG (7616C>G 7618T>G), GGT2438GGA (7624T>A), TTA2439CTA (7625T>C), GTT2445CTT (7643G>C), TAT2450TAC (7660T>C), TCA2469CCA (7715T>C), AAC2475AAT (7735C>T), CAT2478CAC (7744T>C), AAT2479AAC (7747T>C), TTT2488TTC (7774T>C), CAT2492TAT (7784C>T), AGA2516AGG (7858A>G), CCT2519CCC (7867T>C), CCT2522CCA (7876T>A), GCG2523GCA (7879G>A), GGC2541GGT (7933C>T), ACT2543ACC (7939T>C), ACT2550ACA (7960T>A), AAT2557AAC (7981T>C), TGT2563TGC (7999T>C), AAT2566AGT (8007A>G), GCG2568GCA (8014G>A), ACT2570ACC (8020T>C), ACT2573TCT (8027A>T), GGC2574GGT (8032C>T), ATT2575CTT (8033A>C), GTC2579GTT (8047C>T), CTG2598ATG (8102C>A), CAT2605CAC (8125T>C), GTA2611GTT (8143A>T), GCC2615TCC (8153G>T), ATT2616ATC (8158T>C), AGT2619GGT (8165A>G), TTT2620CTT (8168T>C), CTA2622TTA (8174C>T), ACT2639ATT (8226C>T), GAA2640GAC (8230A>C), TTC2647TTT (8251C>T), GTC2654GTT (8272C>T), GAT2656GAC (8278T>C), GGA2660GGC (8290A>C), GGT2662GGG (8296T>G), TCC2668TCT (8314C>T), ACA2669GCA (8315A>G), TTG2670ATG (8318T>A), TTC2672TTT (8326C>T), GTG2676GTT (8338G>T), AAT2681AAC (8353T>C), AAT2683AAC (8359T>C), TTG2694ATG (8390T>A), GTT2698ATC (8402G>A 8404T>C), TGC2701TGT (8413C>T), TTA2702TTG (8416A>G), GCA2705GCG (8425A>G), CTC2722CTT (8476C>T), GTA2724GTT (8482A>T), TTG2731CTT (8501T>C 8503G>T), TCA2737TCT (8521A>T), AAC2743AAT (8539C>T), GTT2749ATC (8555G>A 8557T>C), ATC2752ATT (8566C>T), TAT2755TAC (8575T>C), TTC2756TTT (8578C>T), AGA2759CGG (8585A>C 8587A>G), CTT2761CTC (8593T>C), CCA2764CCT (8602A>T), GGT2765GGC (8605T>C), GTT2766ATT (8606G>A), TTA2767CTA (8609T>C), GCG2769GCA (8617G>A), GGG2770GGA (8620G>A), TTC2771TTT (8623C>T), ATC2773ATT (8629C>T), TTG2776GTG (8636T>G), GCC2779GCT (8647C>T), GTT2783GTG (8659T>G), GTT2785GTG (8665T>G), TAT2787TAC (8671T>C), ATA2788GTA (8672A>G), GTG2790ATG (8678G>A), CTT2792TTC (8684C>T 8686T>C), TAT2793TAC (8689T>C), GAT2794GAC (8692T>C), AAA2803AAG (8719A>G), GTA2804GTT (8722A>T), ACA2806ACG (8728A>G), GAA2810GAG (8740A>G), TTC2818TTT (8764C>T), GAA2834GAG (8812A>G), AAC2850GCA (8858A>G 8859A>C 8860C>A), AGC2851AGT (8863C>T), TAT2855TAC (8875T>C), ACT2859ACC (8887T>C), TCG2861TCA (8893G>A), GAG2864GAA (8902G>A), TGC2871TGT (8923C>T), TAC2872TAT (8926C>T), GCG2878GCA (8944G>A), TCT2883TCC (8959T>C), GTT2884GTC (8962T>C), GAT2888GAC (8974T>C), TAT2891TAC (8983T>C), CTG2902CTA (9016G>A), CAG2903CAA (9019G>A), GGA2905GGG (9025A>G), AGA2907CGA (9029A>C), AGT2913AGC (9049T>C), GTT2915ATT (9053G>A), GTG2916ATT (9056G>A 9058G>T), CCC2918CCT (9064C>T), GTG2923GTA (9079G>A), TAT2925TAC (9085T>C), GGC2926GGT (9088C>T), GTC2939GTT (9127C>T), CAC2944CAT (9142C>T), TAT2956TAC (9178T>C), TTT2968TTC (9214T>C), GCG2975GTG (9234C>T), AAA2983AAG (9259A>G), AAG2985AAA (9265G>A), GTA2987GTG (9271A>G), CTT2991CTC (9283T>C), GTG2993GTA (9289G>A), GTA2996GTT (9298A>T), AAC2997AAT (9301C>T), CCT2998CCC (9304T>C), CCA3001CCG (9313A>G), AAA3006AAG (9328A>G), TCC3007TCT (9331C>T), CCC3024CCT (9382C>T), GTC3027GTA (9391C>A), GTT3030GTG (9400T>G), AGA3033CGG (9407A>C 9409A>G), AGT3034AGC (9412T>C), ATC3038ATT (9424C>T), GGT3040GGC (9430T>C), TTT3042TTC (9436T>C), ACC3046ACT (9448C>T), GTA3053GTG (9469A>G), TTA3054CTA (9470T>C), TTC3061TTT (9493C>T), GGT3072GGC (9526T>C), GAA3080GTA (9549A>T), CAG3090CAA (9580G>A), ATT3115ATC (9655T>C), AAT3116AAC (9658T>C), AAC3124AAT (9682C>T), ACA3125TCA (9683A>T), ACG3128TCG (9692A>T), AAT3139AAC (9727T>C), GAT3148GAC (9754T>C), AAT3151AAC (9763T>C), GCT3154GCC (9772T>C), TCT3185TCC (9865T>C), CTG3186TTG (9866C>T), GAC3188GAT (9874C>T), AGT3206GGT (9926A>G), ATA3212CTA (9944A>C), ATG3216GTG (9956A>G), TTC3226TTT (9988C>T), TTC3230TTT (10000C>T), GTT3247ATT (10049G>A), GTA3254GTG (10072A>G), TTG3257TTA (10081G>A), AAA3263AAG (10099A>G), GTT3277GTC (10141T>C), ATT3278GTT (10142A>G), CAT3283CAC (10159T>C), GAT3288GAC (10174T>C), GTG3297TTC (10199G>T 10201G>C), AAC3301AAT (10213C>T), ACC3304ACA (10222C>A), GTC3309GTT (10237C>T), CAG3312CAA (10246G>A), CTG3318CTT (10264G>T), ATA3326ACA (10287T>C), TGC3327TAC (10290G>A), TTT3331TTC (10303T>C), CTG3341CTA (10333G>A), ATT3346GTT (10346A>G), GTC3353GTT (10369C>T), TTT3368ATT (10412T>A), TTG3370TTA (10420G>A), AAG3385AAA (10465G>A), GCA3392ATA (10484G>A 10485C>T), TAC3394TAT (10492C>T), GTT3396TTT (10496G>T), GGC3414GGT (10552C>T), GTA3419ATA (10565G>A), TAT3428TAC (10594T>C), CTA3429CTG (10597A>G), TGT3432TGC (10606T>C), GGT3435GGC (10615T>C), GCC3458GCT (10684C>T), ACT3473ACG (10729T>G), GGA3490GAA (10779G>A), TCT3500TCC (10810T>C), ACA3508ACG (10834A>G), CTC3513CTT (10849C>T), GGT3514GGC (10852T>C), GAC3545GAT (10945C>T), GCC3546GTT (10947C>T 10948C>T), CTC3548CTT (10954C>T), AAC3577AAT (11041C>T), ACC3578ACT (11044C>T), GTA3584GTG (11062A>G), GCT3589GCA (11077T>A), GCT3590GCC (11080T>C), GCC3602GCA (11116C>A), AAG3622AAA (11176G>A), GCT3623GCA (11179T>A), ATC3626ATT (11188C>T), AGC3629AGT (11197C>T), GAA3630GAG (11200A>G), GAA3634GAG (11212A>G), TCC3636TCA (11218C>A), AAA3654AAG (11272A>G), GCC3658ACC (11282G>A), CTC3673CTT (11329C>T), CTC3677CTT (11341C>T), ACC3687ACT (11371C>T), AGC3700AGT (11410C>T), AGG3724AGA (11482G>A), GAG3740GCA (11529A>C 11530G>A), GTC3749GTT (11557C>T), AAA3752AAG (11566A>G), ATA3768TTA (11612A>T), GAA3780GAG (11650A>G), AAA3789AAG (11677A>G), GGC3799GGT (11707C>T), GCT3810GCC (11740T>C), GGT3813TGT (11747G>T), GTA3852GTT (11866A>T), GAT3853GAA (11869T>A), GTT3860GTC (11890T>C), TAT3862TAC (11896T>C), ACG3884ACA (11962G>A), CTG3887TTG (11969C>T), GGT3900AGT (12008G>A), ACA3903ACG (12019A>G), TTG3904TTA (12022G>A), GAC3917GAT (12061C>T), ACC3927ACT (12091C>T), TGT3929TGC (12097T>C), GCT3942GCC (12136T>C), AAT3945AAC (12145T>C), GGC3946GGT (12148C>T), TCT3949GCT (12155T>G), CAG3953CAA (12169G>A), GAC3954GAT (12172C>T), GGC3958GGT (12184C>T), GCA3959GCT (12187A>T), TCT3960TCA (12190T>A), GTA3961GTT (12193A>T), ATT3963ATC (12199T>C), TAT3964TAC (12202T>C), TGT3965TGC (12205T>C), TGT3967TGC (12211T>C), GTA3969GTT (12217A>T), CAT3971CAC (12223T>C), GCA3973GCT (12229A>T), TTG3977CTA (12239T>C 12241G>A), TTT3980TAT (12249T>A), GGT3982GGC (12256T>C), AAA3983AAG (12259A>G), GTC3985GTG (12265C>G), GTA3987ATA (12269G>A), ACC3989ACT (12277C>T), GGG3990GGC (12280G>C), ACT3991ACC (12283T>C), CAG3992CAA (12286G>A), CCT3994CCA (12292T>A), AGA3996CGT (12296A>C 12298A>T), TGC4004TGT (12322C>T), GTC4005GTT (12325C>T), GTT4006GTC (12328T>C), TGC4007TGT (12331C>T), GGT4008GGC (12334T>C), TGC4009TGT (12337C>T), ACT4012AAC (12345C>A 12346T>C), TGT4015TGC (12355T>C), TGT4017TGC (12361T>C), ATA4022ATG (12376A>G), CAA4023CAG (12379A>G), GGC4024AGT (12380G>A 12382C>T), ACC4025TCT (12383A>T 12385C>T), ATT4027GTT (12389A>G), TAC4061TAT (12492C>T), AAT4062AAC (12495T>C), GCA4066GCG (12507A>G), ACC4074ACA (12531C>A), TCC4077TCA (12540C>A), CGT4078AGA (12541C>A 12543T>A), TTA4082TTG (12555A>G), GTA4090ATT (12577G>A 12579A>T), AAG4092AAA (12585G>A), ACT4095ACA (12594T>A), AGC4097ACC (12599G>C), TCA4112TCT (12645A>T), GTA4114GCT (12650T>C 12651A>T), GAA4117GAG (12660A>G), TTG4122AAC (12673T>A 12674T>A 12675G>C), TAT4123TAC (12678T>C), GAA4125GAG (12684A>G), CGA4127AGA (12688C>A), GAA4129GAG (12696A>G), AAG4136AGG (12716A>G), GAT4137AAT (12718G>A), CTG4146CTT (12747G>T), AGG4151AGA (12762G>A), AAC4152AAT (12765C>T), CTT4161CTC (12792T>C), CTT4165CTC (12804T>C), TTA4168GTA (12811T>G), GCC4170GCT (12819C>T), AAT4172ACT (12824A>C), TCT4174GAA (12829T>G 12830C>A 12831T>A), AAT4178AAC (12843T>C), AAG4179AAA (12846G>A), GTA4185GTT (12864A>T), GCT4189GCC (12876T>C), CAT4191CAC (12882T>C), GTA4193GTT (12888A>T), TAC4194TAT (12891C>T), AGA4196AAA (12896G>A), CCT4199CCC (12906T>C), ATA4200ATT (12909A>T), AAC4203AAT (12918C>T), GTA4209GTT (12936A>T), GCG4210GCT (12939G>T), TGT4212TGC (12945T>C), GCT4214GCA (12951T>A), ATT4215ATA (12954T>A), GGT4219GGC (12966T>C), TAC4220TAT (12969C>T), ACT4225ACA (12984T>A), GAT4227GAC (12990T>C), AAC4228AAT (12993C>T), TTT4235TTC (13014T>C), GGT4239GGA (13026T>A), TTT4241TTC (13032T>C), GTA4242GTG (13035A>G), ACA4244ACT (13041A>T), ACG4245GCT (13042A>G 13044G>T), GGA4249GGT (13056A>T), TGT4250TGC (13059T>C), TGC4252TGT (13065C>T), CCC4262CCT (13095C>T), TGT4269TGC (13116T>C), AAT4274AAC (13131T>C), GCT4283TCT (13156G>T), TAC4288TAT (13173C>T), TTC4295TTT (13194C>T), ACG4296ACT (13197G>T), GAC4297GAA (13200C>A), CAC4298CAT (13203C>T), GAA4300GAG (13209A>G), AAA4301TAC (13210A>T 13212A>C), CAT4304CAA (13221T>A), TAT4306TAC (13227T>C), CAC4309TAC (13234C>T), GAT4311GAG (13242T>G), CGA4312CGC (13245A>C), TAC4314TAT (13251C>T), CAC4315CAT (13254C>T), CCT4316CCA (13257T>A), TGC4318TGT (13263C>T), ACA4322ACT (13275A>T), GAT4324GAC (13281T>C), TGC4326TGT (13287C>T), ACG4335ACA (13314G>A), TCA4338TCT (13323A>T), ACC4340ACA (13329C>A), CCT4342CCA (13335T>A), AGT4343ATG (13337G>T 13338T>G), ACC4344ACA (13341C>A), CTT4400CTC (13509T>C), TAC4440TAT (13629C>T), GGC4465GGT (13704C>T), GAG4467GAA (13710G>A), TAT4475TAC (13734T>C), TAC4476TAT (13737C>T), AAA4494AAG (13791A>G), TTT4500TTC (13809T>C), TAC4503TAT (13818C>T), GAC4504GAT (13821C>T), GAC4519GAT (13866C>T), GGT4523GGC (13878T>C), AGA4573CGA (14026A>C), GTA4577GTG (14040A>G), GAC4619GAT (14166C>T), CTT4622CTC (14175T>C), TTG4625TTA (14184G>A), AAC4631AAT (14202C>T), GGG4636GGA (14217G>A), CGT4644CGC (14241T>C), GCT4653GCC (14268T>C), AAC4677AAT (14340C>T), GGC4691GGT (14382C>T), GGT4699GGC (14406T>C), AAC4711AAT (14442C>T), TCT4712TCA (14445T>A), GGC4729GGA (14496C>A), GTT4738GTC (14523T>C), AAG4741AAA (14532G>A), TAT4795TAC (14694T>C), AAT4811AAC (14742T>C), AGC4826AGT (14787C>T), TGT4833TGC (14808T>C), CAA4835CAG (14814A>G), GTA4841GTT (14832A>T), TAC4851TAT (14862C>T), GAC4853GAT (14868C>T), TCT4855TCC (14874T>C), GTT4864GTC (14901T>C), GTA4880GTG (14949A>G), TAC4902TAT (15015C>T), GGC4918GGT (15063C>T), AAA4947AAG (15150A>G), GGT4955GGC (15174T>C), ACG4979ACT (15246G>T), TAT4983TAC (15258T>C), CAC4991CAT (15282C>T), AAG4992AAA (15285G>A), CAG5030CAA (15399G>A), TTG5031CTG (15400T>C), AAC5040AAT (15429C>T), TTG5044TTA (15441G>A), GGT5051GGC (15462T>C), GAG5053GAA (15468G>A), GAC5071GAT (15522C>T), GCT5121GCC (15672T>C), ACT5135ACG (15714T>G), TCC5161TCT (15792C>T), ACG5167ACT (15810G>T), CTT5172TTG (15823C>T 15825T>G), AAC5210AAT (15939C>T), AAA5229AAG (15996A>G), AAG5241AAA (16032G>A), TTG5250CTG (16057T>C), GAC5268GAT (16113C>T), CTA5270TTA (16117C>T), TTC5278TTT (16143C>T), ACA5297ACG (16200A>G), ACT5304ACC (16221T>C), CTA5316TTA (16255C>T), GTC5326GTT (16287C>T), TAT5346TAC (16347T>C), GGC5353GGA (16368C>A), CCA5355CCG (16374A>G), CAA5356CAG (16377A>G), CCT5359CCA (16386T>A), CTG5364TTG (16399C>T), GTG5382ATG (16453G>A), TTC5390TTT (16479C>T), CAT5392CAC (16485T>C), GTT5409GTG (16536T>G), AAC5412AAT (16545C>T), TCC5437TCT (16620C>T), GCG5451GCA (16662G>A), GCA5454TCA (16669G>T), CAC5455CAT (16674C>T), AAA5461AAG (16692A>G), GCT5462GCC (16695T>C), AGC5470AGT (16719C>T), ACG5483ACA (16758G>A), CAG5484CAA (16761G>A), GAC5487GAT (16770C>T), GTT5497GTC (16800T>C), ATC5498ATT (16803C>T), TCC5503TCT (16818C>T), TTC5514TTT (16851C>T), AGA5532CGA (16903A>C), GAC5545GAT (16944C>T), CAG5551CAA (16962G>A), TTG5559TTA (16986G>A), TCA5564TCG (17001A>G), AGC5566AGT (17007C>T), AGT5580AGC (17049T>C), TTG5581TTA (17052G>A), TCC5582TCT (17055C>T), AAT5584AAC (17061T>C), TTA5591CTA (17080T>C), AAG5598AAA (17103G>A), TAC5620TAT (17169C>T), ACT5626ACG (17187T>G), GAC5628GAT (17193C>T), GGT5639GGC (17226T>C), GAC5641GAT (17232C>T), CCT5657CCC (17280T>C), GAT5667GAC (17310T>C), TGC5675TGT (17334C>T), ATT5701ATC (17412T>C), GAT5730GAC (17499T>C), ATT5733ATC (17508T>C), CCA5755CCT (17574A>T), GGT5761GGC (17592T>C), GTC5773GTT (17628C>T), TGT5791TGC (17682T>C), GAC5793GAT (17688C>T), ACG5800ACA (17709G>A), AGC5804AGT (17721C>T), ATG5805ATT (17724G>T), TGT5811TGC (17742T>C), GAC5841GAT (17832C>T), AAC5851AAT (17862C>T), GTT5862GTG (17895T>G), TTG5871CTG (17920T>C), CAT5880CAC (17949T>C), CCC5885CCT (17964C>T), GGC5887GGA (17970C>A), CCA5894CCT (17991A>T), TTT5898TTC (18003T>C), GAT5901GAC (18012T>C), CGT5902CGA (18015T>A), GAC5915GAT (18054C>T), TAT5916TAC (18057T>C), CTT5925TTA (18082C>T 18084T>A), TTA5927TTG (18090A>G), TGC5931TGT (18102C>T), TTT5939TTC (18126T>C), AGA5944AGG (18141A>G), CGC5950CGA (18159C>A), CTG5953TTG (18166C>T), GTA5965GTC (18204A>C), AAA6009AAG (18336A>G), AAG6016AAA (18357G>A), CTT6030CTC (18399T>C), TAT6038TAC (18423T>C), AAC6039AAT (18426C>T), GGC6045GGT (18444C>T), ACG6047ACA (18450G>A), GAC6055GAT (18474C>T), TAC6057TAT (18480C>T), CTT6059CTG (18486T>G), AAC6078AAT (18543C>T), ACT6086GCC (18565A>G 18567T>C), GAC6099GAT (18606C>T), GGA6106GGG (18627A>G), AAT6115AAC (18654T>C), TTC6125TTT (18684C>T), CTA6127TTA (18688C>T), AAA6130AAG (18699A>G), CGC6131CGT (18702C>T), TAC6151TAT (18762C>T), AAA6152AAG (18765A>G), GAC6157GAT (18780C>T), GAA6161GAG (18792A>G), TGC6162TGT (18795C>T), CCC6163CCT (18798C>T), GTA6182TCA (18853G>T 18854T>C), GAA6194GAG (18891A>G), CGC6195CGT (18894C>T), AAC6208AGC (18932A>G), AAC6245AAT (19044C>T), GAG6247GAT (19050G>T), CAT6258CAG (19083T>G), GGC6288GGT (19173C>T), GTC6302GTT (19215C>T), TCC6303TCT (19218C>T), TCG6315TCA (19254G>A), ACT6332AAT (19304C>A), GAC6359GAT (19386C>T), AAC6414AAT (19551C>T), AGA6443AAA (19637G>A), GTT6452GTC (19665T>C), CTG6476TTG (19735C>T), GTG6492GTA (19785G>A), AAC6506AAT (19827C>T), GGT6542GGC (19935T>C), AAA6545AAG (19944A>G), GAC6548GAT (19953C>T), AAC6551AAT (19962C>T), ACT6559ACC (19986T>C), GCT6575GTT (20033C>T), ACG6607ACC (20130G>C), TCA6608TCG (20133A>G), GAT6630GAC (20199T>C), CAT6651CAC (20262T>C), GAC6656GAT (20277C>T), TTT6660TTC (20289T>C), AAT6666AAC (20307T>C), GTC6681GTT (20352C>T), TTA6690TTG (20379A>G)
11453100%983995.9%1453 (99.9%)1387 (95.3%)2/0/0/01
Protein mutations:L8I (20457C>A 20459C>T), L18S (20488T>C), T21S (20496A>T), E24D (20507A>T), I26R (20512T>G), S46Q (20571A>C 20572G>A 20573T>A), N47S (20575A>G 20576C>T), S53I (20593G>T), R73T (20652C>A 20653G>C 20654A>T), F77Y (20665T>A), Q78E (20667C>G), V89D (20701T>A), V116I (20781G>A 20783T>C), I118_S119insYI (20789_20790insTATATA), R122G (20799A>G), K132E (20829A>G), V136L (20841G>T), H143N (20862C>A), N145D (20868A>G), E147N (20874G>A 20876A>C), Q148T (20877C>A 20878A>C 20879A>C), N155D (20898A>G), T157I (20905C>T), A161N (20916G>A 20917C>A), T172R (20950C>G), D186E (20993C>A), H198N (21027C>A 21029C>T), L199W (21031T>G), T203N (21043C>A), E222H (21099G>C 21101A>C), Y223H (21102T>C), A228V (21118C>T), L251F (21188A>T), H257Y (21204C>T), S270V (21243T>G 21244C>T 21245A>G), I305V (21348A>G), N332S (21430A>G), S378N (21568G>A), S386F (21592C>T), G447D (21775G>A), V457D (21805T>A), N483K (21884T>G), F517L (21984T>C 21986C>T), S527I (22015G>T), T530A (22023A>G), Y531H (22026T>C 22028C>T), V534I (22035G>A), L544R (22066T>G), T584I (22186C>T), D597E (22226C>A), E603D (22244G>T), D691E (22508T>G), R705Q (22549G>A), T768K (22738C>A), S786N (22792G>A), V804I (22845G>A), N837T (22945A>C), S938N (23248G>A), G961R (23316G>C), A1014D (23476C>A), Q1094K (23715C>A), S1237P (24144T>C), V1279A (24271T>C), F1333L (24434T>G), V1405I (24648G>A), F1416C (24682T>G), I1434M (24737A>G)
Codon mutations:CTC8ATT (20457C>A 20459C>T), TTG9TTA (20462G>A), TGT12TGC (20471T>C), ACA16ACT (20483A>T), TTG18TCG (20488T>C), ACA20ACG (20495A>G), ACA21TCA (20496A>T), AAT22AAC (20501T>C), GAA24GAT (20507A>T), TGC25TGT (20510C>T), ATA26AGA (20512T>G), TTG33TTA (20534G>A), ATC40ATT (20555C>T), GAT42GAC (20561T>C), CTG44TTG (20565C>T), AGT46CAA (20571A>C 20572G>A 20573T>A), AAC47AGT (20575A>G 20576C>T), AGT53ATT (20593G>T), GCT72GCA (20651T>A), CGA73ACT (20652C>A 20653G>C 20654A>T), ACT74ACC (20657T>C), TTT77TAT (20665T>A), CAG78GAG (20667C>G), GTT89GAT (20701T>A), GCC92GCT (20711C>T), AAT99AAC (20732T>C), CCA104CCT (20747A>T), TTA105CTA (20748T>C), GTG109GTT (20762G>T), GAG112GAA (20771G>A), GTT116ATC (20781G>A 20783T>C), ATT117ATC (20786T>C), ATA118_TCG119insTATATA (20789_20790insTATATA), TCG119TCA (20792G>A), AGG122GGG (20799A>G), CCC129CCA (20822C>A), AAA132GAA (20829A>G), GTG136TTG (20841G>T), ATA138ATT (20849A>T), CAT143AAT (20862C>A), AAC145GAC (20868A>G), GAA147AAC (20874G>A 20876A>C), CAA148ACC (20877C>A 20878A>C 20879A>C), TCC151AGC (20886T>A 20887C>G), AAT155GAT (20898A>G), ACA157ATA (20905C>T), GCT161AAT (20916G>A 20917C>A), ACG172AGG (20950C>G), GAC173GAT (20954C>T), GGT180GGG (20975T>G), GAC186GAA (20993C>A), GCT190GCG (21005T>G), CAC198AAT (21027C>A 21029C>T), TTG199TGG (21031T>G), ACT203AAT (21043C>A), AAT204AAC (21047T>C), AGC217AGT (21086C>T), GCT219GCC (21092T>C), ACC220ACA (21095C>A), GAA222CAC (21099G>C 21101A>C), TAC223CAC (21102T>C), GCT228GTT (21118C>T), CTA246TTA (21171C>T), TTA251TTT (21188A>T), GAA253GAG (21194A>G), CAT257TAT (21204C>T), TAT261TAC (21218T>C), GCT262GCC (21221T>C), ACC263ACT (21224C>T), GTA265GTC (21230A>C), CCG268CCA (21239G>A), ACA269ACT (21242A>T), TCA270GTG (21243T>G 21244C>T 21245A>G), GGT271GGA (21248T>A), TTC284TTT (21287C>T), AGT289AGC (21302T>C), AGG296AGA (21323G>A), AAT300AAC (21335T>C), TTA303CTA (21342T>C), TTG304TTA (21347G>A), ATT305GTT (21348A>G), AAT306AAC (21353T>C), TTG308TTA (21359G>A), GCA326GCG (21413A>G), AGC329AGT (21422C>T), CAA330CAG (21425A>G), AAT332AGT (21430A>G), GTG334GTA (21437G>A), GTG340GTA (21455G>A), AAC346AAT (21473C>T), ACT350ACC (21485T>C), GGT356GGC (21503T>C), GTA361GTG (21518A>G), TCA363TCG (21524A>G), CTG364TTG (21525C>T), ACA367ACG (21536A>G), AGT378AAT (21568G>A), TCT386TTT (21592C>T), ATC392ATT (21611C>T), GAC398GAT (21629C>T), CGA401CGG (21638A>G), AAA413AAG (21674A>G), CCC420CCT (21695C>T), GGT447GAT (21775G>A), AAT452AAC (21791T>C), GTT457GAT (21805T>A), TAT469TAC (21842T>C), GAA471GAG (21848A>G), GCT480GCC (21875T>C), AAT483AAG (21884T>G), AAA495AAG (21920A>G), GAA514GAG (21977A>G), GTA515GTT (21980A>T), TTC517CTT (21984T>C 21986C>T), GTT518GTG (21989T>G), AGC527ATC (22015G>T), ACA530GCA (22023A>G), TAC531CAT (22026T>C 22028C>T), GTC534ATC (22035G>A), CTT544CGT (22066T>G), AGT545AGC (22070T>C), GCC552GCA (22091C>A), TCG553TCA (22094G>A), CTA555TTA (22098C>T), ATC558ATT (22109C>T), AAC565AAT (22130C>T), AAT566AAC (22133T>C), ACT567ACA (22136T>A), CAA576CAG (22163A>G), TTC577TTT (22166C>T), TCC583TCT (22184C>T), ACT584ATT (22186C>T), TGC585TGT (22190C>T), AAA586AAG (22193A>G), GAC597GAA (22226C>A), GAG603GAT (22244G>T), GCT604GCC (22247T>C), AAA609AAG (22262A>G), TTG624TTA (22307G>A), GGT637GGC (22346T>C), AAT639AAC (22352T>C), GCT645GCC (22370T>C), CAG653CAA (22394G>A), GTG669GTT (22442G>T), GAT691GAG (22508T>G), TAC692TAT (22511C>T), CGA705CAA (22549G>A), AGT712AGC (22571T>C), ATT734ATC (22637T>C), ACG738ACA (22649G>A), AGC743AGT (22664C>T), ACA768AAA (22738C>A), CAT769CAC (22742T>C), ACG772ACA (22751G>A), TAC784TAT (22787C>T), AGT786AAT (22792G>A), GTC804ATC (22845G>A), AAT809AAC (22862T>C), GAC827GAT (22916C>T), AAT837ACT (22945A>C), AAT843AAC (22964T>C), ACT845ACC (22970T>C), GTT850GTC (22985T>C), ACT857ACC (23006T>C), TGT869TGC (23042T>C), GTG883GTT (23084G>T), GAA890GAG (23105A>G), TTT909TTC (23162T>C), GTC910GTT (23165C>T), TCG911TCT (23168G>T), GAT930GAC (23225T>C), AGC938AAC (23248G>A), CTA944TTA (23265C>T), CTA947TTA (23274C>T), GAT949GAC (23282T>C), CTA951CTG (23288A>G), GGT961CGT (23316G>C), GAT966GAC (23333T>C), AAA971AAG (23348A>G), ACA974ACT (23357A>T), ACT988ACA (23399T>A), TAC991TAT (23408C>T), GCA994GCC (23417A>C), TTG996TTA (23423G>A), GTT1007GTG (23456T>G), CTA1008TTA (23457C>T), CCA1009CCT (23462A>T), GCT1014GAT (23476C>A), TCA1023TCT (23504A>T), TTA1030CTA (23523T>C), GTG1038GTT (23549G>T), GTA1046GTT (23573A>T), CAG1047CAA (23576G>A), CAA1064CAG (23627A>G), GCT1081GCA (23678T>A), GGT1083GGC (23684T>C), CAA1094AAA (23715C>A), GCC1097GCA (23726C>A), GCG1102GCA (23741G>A), AGT1118AGC (23789T>C), CTT1120CTA (23795T>A), AGT1133AGC (23834T>C), GGT1157GGA (23906T>A), GCA1174GCG (23957A>G), AAA1184AAG (23987A>G), AGG1192AGA (24011G>A), TCT1193TCC (24014T>C), CAG1194CAA (24017G>A), TTC1198TTT (24029C>T), CAT1206CAC (24053T>C), CTA1210CTT (24065A>T), GTA1224GTG (24107A>G), ACA1228ACG (24119A>G), TCA1237CCA (24144T>C), TTC1248TTT (24179C>T), GTG1255GTA (24200G>A), AAT1262AAC (24221T>C), ACC1270ACT (24245C>T), GTT1279GCT (24271T>C), GAA1289GAG (24302A>G), TGT1291TGC (24308T>C), AAC1297AAT (24326C>T), GCG1298GCA (24329G>A), GAT1302GAC (24341T>C), ATT1313ATC (24374T>C), CAA1315CAG (24380A>G), GAC1319GAT (24392C>T), TTT1333TTG (24434T>G), TTC1338TTT (24449C>T), GAG1353GAA (24494G>A), CAT1360CAC (24515T>C), AAC1361AAT (24518C>T), ACT1362ACC (24521T>C), ACA1363ACT (24524A>T), GAT1371GAC (24548T>C), AAT1374AAC (24557T>C), AAT1375AAC (24560T>C), CTG1399CTA (24632G>A), GGT1401GGC (24638T>C), GTA1405ATA (24648G>A), CTG1411TTG (24666C>T), TTT1416TGT (24682T>G), AGC1417AGT (24686C>T), TGT1426TGC (24713T>C), ATA1434ATG (24737A>G), CAT1450CAC (24785T>C)
172100%41593.9%72 (100%)69 (95.8%)0/0/0/01
Protein mutations:I9T (24886T>C), F10S (24889T>C), F61I (25041T>A)
Codon mutations:GAC2GAT (24866C>T), ATA9ACA (24886T>C), TTC10TCC (24889T>C), GAC19GAT (24917C>T), GTA25GTT (24935A>T), GAC51GAT (25013C>T), GCG53GCA (25019G>A), TTT61ATT (25041T>A), TAG72TAA (25076G>A)
155100%27396.1%51 (70.8%)49 (68.1%)0/21/0/00
Protein mutations:S19N (25076G>A), R46K (25157G>A), S51_K54del (25171_25182delAGTGTTACAAAA)
Codon mutations:CCT7CCA (25041T>A), AGT19AAT (25076G>A), ACT21ACA (25083T>A), AAA26AAG (25098A>G), TAT31TAC (25113T>C), CTA33TTA (25117C>T), AGA38AGG (25134A>G), AGA46AAA (25157G>A), TTA50TTG (25170A>G), AGT51_AAA54del (25171_25182delAGTGTTACAAAA)
183100%49485.8%83 (100%)65 (78.3%)0/0/0/01
Protein mutations:F7L (25974T>G), I9V (25978A>G), H13N (25990C>A), V17I (26002G>A), V19I (26008G>A), F20I (26011T>A 26013C>T), L23F (26020C>T), S33L (26051C>T), V39I (26068G>A 26070T>A), K51R (26105A>G 26106G>A), I53V (26110A>G), V55I (26116G>A 26118A>T), L56V (26119C>G 26121A>T), R59Q (26129G>A 26130C>A), T67N (26153C>A 26154C>T), Q70R (26162A>G), T71I (26165C>T 26166C>T), F80L (26191T>C 26193T>C)
Codon mutations:CCT4CCC (25965T>C), TTT7TTG (25974T>G), ATC9GTC (25978A>G), CAT13AAT (25990C>A), GGC14GGA (25995C>A), GTT16GTC (26001T>C), GTT17ATT (26002G>A), AGC18AGT (26007C>T), GTC19ATC (26008G>A), TTC20ATT (26011T>A 26013C>T), CTC23TTC (26020C>T), ATT27ATC (26034T>C), TTG31TTA (26046G>A), TCA33TTA (26051C>T), GTT39ATA (26068G>A 26070T>A), AAA41AAG (26076A>G), TTG42CTA (26077T>C 26079G>A), TTG49TTA (26100G>A), GGT50GGA (26103T>A), AAG51AGA (26105A>G 26106G>A), ACT52ACA (26109T>A), ATT53GTT (26110A>G), ATA54ATC (26115A>C), GTA55ATT (26116G>A 26118A>T), CTA56GTT (26119C>G 26121A>T), GCA58GCG (26127A>G), CGC59CAA (26129G>A 26130C>A), GCA61GCT (26136A>T), TAT62TAC (26139T>C), ACC67AAT (26153C>A 26154C>T), TTT68TTC (26157T>C), CAA70CGA (26162A>G), ACC71ATT (26165C>T 26166C>T), AAG72AAA (26169G>A), TAT74TAC (26175T>C), AAT75AAC (26178T>C), GAC77GAT (26184C>T), TTT80CTC (26191T>C 26193T>C), TTG81CTT (26194T>C 26196G>T)
1263100%175094.5%262 (98.9%)245 (92.5%)2/1/0/01
Protein mutations:Y3del (26219_26221delTAC), I11A (26243A>G 26244T>C), I12V (26246A>G), E18_R19insQI (26266_26267insCAAATA), D25E (26287C>G), S26T (26289G>C), Q29S (26297C>T 26298A>C 26299G>A), I31R (26303A>C 26304T>G 26305T>C), N35A (26315A>G 26316A>C 26317T>A), R37D (26321A>G 26322G>A 26323A>T), Q39E (26327C>G 26329A>G), T40S (26330A>T 26332C>A), E43N (26339G>A 26341A>T), R44G (26342C>G 26344T>A), V60I (26390G>A), L79F (26447C>T), Q108E (26534C>G), V137I (26621G>A), S212N (26847G>A)
Codon mutations:TAC3del (26219_26221delTAC), CTA6TTA (26228C>T), CTC8TTA (26234C>T 26236C>A), ATA11GCA (26243A>G 26244T>C), ATT12GTT (26246A>G), TAT16TAC (26260T>C), GGT17GGG (26263T>G), GAA18GAG (26266A>G), GAA18_CGC19insCAAATA (26266_26267insCAAATA), CGC19AGG (26267C>A 26269C>G), GCC22GCT (26278C>T), GAC25GAG (26287C>G), AGT26ACT (26289G>C), GGC27GGT (26293C>T), CAG29TCA (26297C>T 26298A>C 26299G>A), ATT31CGC (26303A>C 26304T>G 26305T>C), GGC33GGT (26311C>T), AAT35GCA (26315A>G 26316A>C 26317T>A), TCA36TCT (26320A>T), AGA37GAT (26321A>G 26322G>A 26323A>T), CAA39GAG (26327C>G 26329A>G), ACC40TCA (26330A>T 26332C>A), TTT42TTC (26338T>C), GAA43AAT (26339G>A 26341A>T), CGT44GGA (26342C>G 26344T>A), GCT52GCA (26368T>A), GTA60ATA (26390G>A), ATT63ATC (26401T>C), ACA67ACG (26413A>G), GTG68GTT (26416G>T), TTA69CTA (26417T>C), GGC72GGT (26428C>T), CCA74CCT (26434A>T), CTC79TTC (26447C>T), GTT80GTG (26452T>G), CTG86CTT (26470G>T), ATC87ATT (26473C>T), CTA96TTG (26498C>T 26500A>G), GCG97GCT (26503G>T), TCT105TCG (26527T>G), GAG106GAA (26530G>A), TAC107TAT (26533C>T), CAA108GAA (26534C>G), ACG125ACA (26587G>A), GTT137ATT (26621G>A), AGA142AGG (26638A>G), AAT150AAC (26662T>C), GAG152GAA (26668G>A), AAT160AAC (26692T>C), GCA161GCG (26695A>G), AGT165AGC (26707T>C), GTG167GTT (26713G>T), CTT168TTG (26714C>T 26716T>G), TTA170CTT (26720T>C 26722A>T), GGT172GGC (26728T>C), ACT173ACA (26731T>A), CCT174CCC (26734T>C), ACA175ACG (26737A>G), ACC178ACT (26746C>T), CTT179CTC (26749T>C), ACT180ACG (26752T>G), TTC191TTT (26785C>T), TTA197CTC (26801T>C 26803A>C), ATC199ATT (26809C>T), GAG200GAA (26812G>A), TTG202TTA (26818G>A), ACA210ACG (26842A>G), AGT212AAT (26847G>A), TAT217TAC (26863T>C), TTA224TTG (26884A>G), ACA230ACG (26902A>G), TAC235TAT (26917C>T), GCT240GCC (26932T>C), GAC250GAT (26962C>T)
1378100%247794.0%377 (99.7%)355 (93.9%)0/1/0/01
Protein mutations:F35Y (27117T>A), Y36F (27120A>T), E42D (27139A>C), L55F (27176C>T), I74A (27233A>G 27234T>C 27235T>G), K84V (27263A>G 27264A>T), A87P (27272G>C), D107A (27333A>C 27334C>T), T126S (27389A>T 27391G>A), R140K (27432G>A), H180Q (27553C>A), H181Q (27556T>G), N187T (27573A>C), E198Q (27605G>C), P212S (27647C>T), R213G (27650A>G), D217Q (27662G>C 27664T>G), P220S (27671C>T 27673T>C), T244N (27744C>A), I284L (27863A>C), T305N (27927C>A 27928C>T), R339K (28029G>A), V357del (28082_28084delGTG)
Codon mutations:AAA16AAG (27061A>G), TTG33CTT (27110T>C 27112G>T), TTC35TAC (27117T>A), TAC36TTC (27120A>T), ATT39ATC (27130T>C), GAA42GAC (27139A>C), TCT45TCA (27148T>A), AAA46AAG (27151A>G), AAT49AAC (27160T>C), CTT55TTT (27176C>T), AAA58AAG (27187A>G), AAG63AAA (27202G>A), CAA66CAG (27211A>G), GGT68GGC (27217T>C), AAT71AAC (27226T>C), ATT74GCG (27233A>G 27234T>C 27235T>G), TAT76TAC (27241T>C), CGT77CGC (27244T>C), GTA79GTC (27250A>C), GGC81GGA (27256C>A), AAG84GTG (27263A>G 27264A>T), GCT87CCT (27272G>C), GAG88GAA (27277G>A), AGG89AGA (27280G>A), TTT92TTC (27289T>C), CAT100CAC (27313T>C), GCT103GCC (27322T>C), TTC105TTT (27328C>T), AAA106AAG (27331A>G), GAC107GCT (27333A>C 27334C>T), GAT110GAC (27343T>C), GGA111GGT (27346A>T), CCC124CCA (27385C>A), ACG126TCA (27389A>T 27391G>A), AAT133AAC (27412T>C), AAC134AAT (27415C>T), AGA140AAA (27432G>A), TTT141TTC (27436T>C), CCG146CCA (27451G>A), CAG148CAA (27457G>A), TTT149TTC (27460T>C), TCA160TCC (27493A>C), TCT164TCC (27505T>C), CAC180CAA (27553C>A), CAT181CAG (27556T>G), AAT187ACT (27573A>C), ATT193ATC (27592T>C), GAA198CAA (27605G>C), AAA205AAG (27628A>G), CCT212TCT (27647C>T), AGA213GGA (27650A>G), GAT217CAG (27662G>C 27664T>G), AAA219AAG (27670A>G), CCT220TCC (27671C>T 27673T>C), ACT236ACC (27721T>C), GGC238GGT (27727C>T), GGA240GGT (27733A>T), ACT244AAT (27744C>A), ATC284CTC (27863A>C), CTC302CTT (27919C>T), ACC305AAT (27927C>A 27928C>T), TAC306TAT (27931C>T), AAG310AAA (27943G>A), ACT315ACC (27958T>C), AGT316AGC (27961T>C), GAC323GAT (27982C>T), TAC325TAT (27988C>T), CGA327CGT (27994A>T), AGA339AAA (28029G>A), GAG351GAA (28066G>A), GTG357del (28082_28084delGTG), ATT372ATC (28129T>C), GTT375GTA (28138T>A)
1102100%62999.4%102 (100%)101 (99.0%)0/0/0/01
Protein mutations:V5L (28164G>C)
Codon mutations:TTC4TTT (28163C>T), GTC5CTC (28164G>C), CTT35CTC (28256T>C), ACA36ACG (28259A>G), GTC38GTT (28265C>T), AGT48AGC (28295T>C), CGT50CGA (28301T>A), AAT52AAC (28307T>C), TGT53TGC (28310T>C), TTG54TTA (28313G>A), AAT65AAC (28346T>C), AGG75AGA (28376G>A)
1185100%68084.4%128 (61.8%)112 (54.1%)0/79/0/00
Protein mutations:I5V (28474A>G), N22P (28525A>C 28526A>C), I39V (28576A>G 28578A>T), H41N (28582C>A 28584T>C), G63S (28648G>A), I64V (28651A>G 28653C>T), E65D (28656A>T), W71R (28672T>C), D76N (28687G>A), P77S (28690C>T), S103V (28768A>G 28769G>T), R108K (28784G>A), N124K (28833T>A), V125L (28834G>C 28836T>G), G126S (28837G>A), C127_V183del (28840_29010delTGTCATACATCATTTGCTGTTGATCTTCCATTTGGGATTCAGATATACCATGACAGGGATTTTCAACACCCTGTTGATGGCAGACATCTAGATTGTACTCACAGAGTGTACTTTGTGAAGTACTGTCCACATAACCTGCATGGTTATTGCTTTAATGAGAGGCTGAAAGTT), D185K (29014G>A 29016C>G)
Codon mutations:ATC5GTC (28474A>G), AAT22CCT (28525A>C 28526A>C), CCC28CCA (28545C>A), GTT29GTC (28548T>C), ACC31ACT (28554C>T), GAT33GAC (28560T>C), TTA34TTG (28563A>G), TTA35TTG (28566A>G), CAG36CAA (28569G>A), TTC38TTT (28575C>T), ATA39GTT (28576A>G 28578A>T), CAT41AAC (28582C>A 28584T>C), CTC43CTT (28590C>T), ATT45ATC (28596T>C), ACA46ACC (28599A>C), CCG54CCT (28623G>T), GGA56GGG (28629A>G), TCT57TCA (28632T>A), GTT59GTG (28638T>G), GGT63AGT (28648G>A), ATC64GTT (28651A>G 28653C>T), GAA65GAT (28656A>T), TGG71CGG (28672T>C), GAT76AAT (28687G>A), CCT77TCT (28690C>T), TAC85TAT (28716C>T), TCA94TCC (28743A>C), GTA96GTG (28749A>G), AGT103GTT (28768A>G 28769G>T), GAG104GAA (28773G>A), AGA108AAA (28784G>A), TTG113TTA (28800G>A), AAT124AAA (28833T>A), GTT125CTG (28834G>C 28836T>G), GGT126AGT (28837G>A), TGT127_GTT183del (28840_29010delTGTCATACATCATTTGCTGTTGATCTTCCATTTGGGATTCAGATATACCATGACAGGGATTTTCAACACCCTGTTGATGGCAGACATCTAGATTGTACTCACAGAGTGTACTTTGTGAAGTACTGTCCACATAACCTGCATGGTTATTGCTTTAATGAGAGGCTGAAAGTT), GAC185AAG (29014G>A 29016C>G)
*: Inserts / Deletes / Misaligned / Frameshifts

Analysis details

This analysis was performed with panviral2.43