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Measles Virus Typing Tool

This tool uses Blast to confirm the virus species and phylogenetic methods to identify the Measles Virus genotypes of a nucleotide sequence. The entire N-450 sequence (The 450 nucleotides encoding the carboxyl-terminal 150 amino acids of the nucleoprotein (N-450)) is required for accurate determination of the genotype.

Note for batch analysis: The tool accepts up to 2000 sequences at a time.


Submit one or more FASTA sequences to be typed individually. If you have raw NGS reads (short reads or long reads), please use the Genome Detective Platform to assemble first. Subtyping tools will be linked in the results.
Click here to load some sample data.

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