May 2023: Genome Detective has been reorganized. Virus identification and subtyping tools
remain available on this page, but all analysis starting from FASTQ files have been
permanently moved to the new Genome
Detective Platform. The Genome Detective Platform supports metagenomic, WGS, amplicon and barcoding analysis
of FASTQ files for Virus, Bacteria, Fungi and Parasites (Fungi, Parasites and barcoding (16S/ITS) are
available in Beta test upon request). The platform includes long-term data
management (storage, retrieval, annotation, search) and intra-sample analysis tools.
The Genome Detective Virus tool (this webpage) offers two functions:
- The identification of reassembled viral genomes (FASTA files)
- Virus subtyping tools: phylogenetic genotyping of a reassembled viral genome to obtain the sub-species type. The list of available subtyping tools is at the bottom of this page.
Up to 2000 FASTA sequences may be submitted at once.